Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.54■□□□□ 0.56
IRX4P78413 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IRX4P78413 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX4P78413 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IRX4P78413 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX4P78413 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX4P78413 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX4P78413 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IRX4P78413 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX4P78413 AC008764.6-201ENST00000595909 2069 ntBASIC18.53■□□□□ 0.56
IRX4P78413 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IRX4P78413 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.53■□□□□ 0.56
IRX4P78413 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX4P78413 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX4P78413 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX4P78413 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX4P78413 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IRX4P78413 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IRX4P78413 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.53■□□□□ 0.56
IRX4P78413 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
IRX4P78413 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.53■□□□□ 0.56
IRX4P78413 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.53■□□□□ 0.56
IRX4P78413 MIR3180-5-201ENST00000583743 153 ntBASIC18.53■□□□□ 0.56
IRX4P78413 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.53■□□□□ 0.56
IRX4P78413 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.53■□□□□ 0.56
IRX4P78413 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.53■□□□□ 0.56
IRX4P78413 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX4P78413 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IRX4P78413 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX4P78413 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX4P78413 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX4P78413 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IRX4P78413 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
IRX4P78413 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
IRX4P78413 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
IRX4P78413 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
IRX4P78413 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
IRX4P78413 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.52■□□□□ 0.56
IRX4P78413 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
IRX4P78413 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
IRX4P78413 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
IRX4P78413 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
IRX4P78413 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.52■□□□□ 0.56
IRX4P78413 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
IRX4P78413 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
IRX4P78413 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.52■□□□□ 0.56
IRX4P78413 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.52■□□□□ 0.56
IRX4P78413 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
IRX4P78413 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.52■□□□□ 0.56
IRX4P78413 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.52■□□□□ 0.56
IRX4P78413 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.52■□□□□ 0.56
IRX4P78413 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
IRX4P78413 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.52■□□□□ 0.55
IRX4P78413 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
IRX4P78413 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.52■□□□□ 0.55
IRX4P78413 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
IRX4P78413 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.52■□□□□ 0.55
IRX4P78413 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
IRX4P78413 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
IRX4P78413 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
IRX4P78413 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
IRX4P78413 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.51■□□□□ 0.55
IRX4P78413 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IRX4P78413 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
IRX4P78413 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
IRX4P78413 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IRX4P78413 AL357033.4-201ENST00000617703 1807 ntBASIC18.51■□□□□ 0.55
IRX4P78413 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IRX4P78413 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
IRX4P78413 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IRX4P78413 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.51■□□□□ 0.55
IRX4P78413 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
IRX4P78413 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IRX4P78413 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IRX4P78413 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.51■□□□□ 0.55
IRX4P78413 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IRX4P78413 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IRX4P78413 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
IRX4P78413 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
IRX4P78413 MRPL3P1-201ENST00000400109 1033 ntBASIC18.51■□□□□ 0.55
IRX4P78413 MCCD1P1-208ENST00000445732 328 ntBASIC18.51■□□□□ 0.55
IRX4P78413 AL662844.1-201ENST00000546340 181 ntBASIC18.51■□□□□ 0.55
IRX4P78413 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IRX4P78413 MIR3917-201ENST00000580971 93 ntBASIC18.51■□□□□ 0.55
IRX4P78413 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.51■□□□□ 0.55
IRX4P78413 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IRX4P78413 AC112497.1-201ENST00000624824 639 ntBASIC18.51■□□□□ 0.55
IRX4P78413 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IRX4P78413 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IRX4P78413 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.51■□□□□ 0.55
IRX4P78413 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
IRX4P78413 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IRX4P78413 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IRX4P78413 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms