Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC12.7□□□□□ -0.38
UBE2D3P61077 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
UBE2D3P61077 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC12.7□□□□□ -0.38
UBE2D3P61077 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
UBE2D3P61077 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
UBE2D3P61077 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
UBE2D3P61077 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
UBE2D3P61077 CYP2D8P-201ENST00000433633 1490 ntBASIC12.7□□□□□ -0.38
UBE2D3P61077 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
UBE2D3P61077 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D3P61077 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D3P61077 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.69□□□□□ -0.38
UBE2D3P61077 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D3P61077 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC12.69□□□□□ -0.38
UBE2D3P61077 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
UBE2D3P61077 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D3P61077 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D3P61077 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D3P61077 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D3P61077 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC12.69□□□□□ -0.38
UBE2D3P61077 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D3P61077 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D3P61077 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
UBE2D3P61077 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D3P61077 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
UBE2D3P61077 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC12.69□□□□□ -0.38
UBE2D3P61077 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D3P61077 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
UBE2D3P61077 HMGA1P5-201ENST00000412453 271 ntBASIC12.69□□□□□ -0.38
UBE2D3P61077 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D3P61077 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC12.69□□□□□ -0.38
UBE2D3P61077 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC12.69□□□□□ -0.38
UBE2D3P61077 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
UBE2D3P61077 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC12.69□□□□□ -0.38
UBE2D3P61077 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC12.69□□□□□ -0.38
UBE2D3P61077 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
UBE2D3P61077 GPX4-207ENST00000589115 812 ntTSL 2 BASIC12.69□□□□□ -0.38
UBE2D3P61077 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC12.69□□□□□ -0.38
UBE2D3P61077 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D3P61077 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC12.69□□□□□ -0.38
UBE2D3P61077 AC010947.1-201ENST00000623454 693 ntBASIC12.69□□□□□ -0.38
UBE2D3P61077 AC092865.7-201ENST00000641832 219 ntBASIC12.69□□□□□ -0.38
UBE2D3P61077 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D3P61077 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC12.69□□□□□ -0.38
UBE2D3P61077 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
UBE2D3P61077 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D3P61077 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
UBE2D3P61077 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D3P61077 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
UBE2D3P61077 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
UBE2D3P61077 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D3P61077 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC12.69□□□□□ -0.38
UBE2D3P61077 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
UBE2D3P61077 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D3P61077 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D3P61077 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D3P61077 PCDH8P1-201ENST00000428983 2773 ntBASIC12.69□□□□□ -0.38
UBE2D3P61077 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D3P61077 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D3P61077 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC12.69□□□□□ -0.38
UBE2D3P61077 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D3P61077 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D3P61077 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D3P61077 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D3P61077 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D3P61077 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
UBE2D3P61077 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
UBE2D3P61077 PKD1P1-201ENST00000458669 6805 ntBASIC12.68□□□□□ -0.38
UBE2D3P61077 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D3P61077 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D3P61077 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
UBE2D3P61077 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
UBE2D3P61077 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D3P61077 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC12.68□□□□□ -0.38
UBE2D3P61077 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D3P61077 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC12.68□□□□□ -0.38
UBE2D3P61077 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D3P61077 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D3P61077 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D3P61077 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC12.68□□□□□ -0.38
UBE2D3P61077 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D3P61077 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D3P61077 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms