Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.51□□□□□ -0.41
CKS1BP61024 PCDHB19P-201ENST00000570871 2371 ntBASIC12.51□□□□□ -0.41
CKS1BP61024 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CKS1BP61024 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CKS1BP61024 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CKS1BP61024 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC12.51□□□□□ -0.41
CKS1BP61024 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC12.51□□□□□ -0.41
CKS1BP61024 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC12.51□□□□□ -0.41
CKS1BP61024 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CKS1BP61024 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CKS1BP61024 CD276-201ENST00000318424 2738 ntTSL 5 BASIC12.51□□□□□ -0.41
CKS1BP61024 CICP14-201ENST00000629111 2732 ntBASIC12.51□□□□□ -0.41
CKS1BP61024 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
CKS1BP61024 HEIH-201ENST00000623091 1652 ntBASIC12.51□□□□□ -0.41
CKS1BP61024 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CKS1BP61024 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CKS1BP61024 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CKS1BP61024 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CKS1BP61024 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CKS1BP61024 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CKS1BP61024 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CKS1BP61024 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
CKS1BP61024 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.51□□□□□ -0.41
CKS1BP61024 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CKS1BP61024 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC12.51□□□□□ -0.41
CKS1BP61024 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CKS1BP61024 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CKS1BP61024 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC12.5□□□□□ -0.41
CKS1BP61024 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS1BP61024 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC12.5□□□□□ -0.41
CKS1BP61024 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS1BP61024 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CKS1BP61024 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CKS1BP61024 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC12.5□□□□□ -0.41
CKS1BP61024 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS1BP61024 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC12.5□□□□□ -0.41
CKS1BP61024 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC12.5□□□□□ -0.41
CKS1BP61024 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CKS1BP61024 SLC29A4P2-201ENST00000504749 1089 ntBASIC12.5□□□□□ -0.41
CKS1BP61024 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS1BP61024 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC12.5□□□□□ -0.41
CKS1BP61024 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC12.5□□□□□ -0.41
CKS1BP61024 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS1BP61024 WT1-AS_3.1-201ENST00000613262 234 ntBASIC12.5□□□□□ -0.41
CKS1BP61024 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CKS1BP61024 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS1BP61024 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS1BP61024 NBPF21P-201ENST00000425093 1451 ntBASIC12.5□□□□□ -0.41
CKS1BP61024 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
CKS1BP61024 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS1BP61024 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC12.5□□□□□ -0.41
CKS1BP61024 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC12.5□□□□□ -0.41
CKS1BP61024 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS1BP61024 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CKS1BP61024 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CKS1BP61024 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS1BP61024 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS1BP61024 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CKS1BP61024 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS1BP61024 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
CKS1BP61024 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS1BP61024 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
CKS1BP61024 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS1BP61024 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS1BP61024 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
CKS1BP61024 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS1BP61024 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CKS1BP61024 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS1BP61024 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS1BP61024 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CKS1BP61024 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS1BP61024 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS1BP61024 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CKS1BP61024 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC12.49□□□□□ -0.41
CKS1BP61024 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC12.49□□□□□ -0.41
CKS1BP61024 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC12.49□□□□□ -0.41
CKS1BP61024 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC12.49□□□□□ -0.41
CKS1BP61024 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS1BP61024 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
CKS1BP61024 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CKS1BP61024 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS1BP61024 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CKS1BP61024 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC12.49□□□□□ -0.41
CKS1BP61024 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CKS1BP61024 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS1BP61024 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC12.49□□□□□ -0.41
CKS1BP61024 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CKS1BP61024 TSPY6P-201ENST00000448518 926 ntBASIC12.49□□□□□ -0.41
CKS1BP61024 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS1BP61024 DLX3-202ENST00000512495 834 ntTSL 2 BASIC12.49□□□□□ -0.41
CKS1BP61024 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CKS1BP61024 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CKS1BP61024 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC12.49□□□□□ -0.41
CKS1BP61024 AL138781.1-201ENST00000566567 1274 ntBASIC12.49□□□□□ -0.41
CKS1BP61024 IKBKGP1-201ENST00000612193 1073 ntBASIC12.49□□□□□ -0.41
CKS1BP61024 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CKS1BP61024 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
CKS1BP61024 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS1BP61024 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CKS1BP61024 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms