Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP4BP1P59074 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP4BP1P59074 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CHMP4BP1P59074 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.34■□□□□ 0.85
CHMP4BP1P59074 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
CHMP4BP1P59074 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP4BP1P59074 AL499627.1-201ENST00000569373 2188 ntBASIC20.34■□□□□ 0.85
CHMP4BP1P59074 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP4BP1P59074 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP4BP1P59074 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
CHMP4BP1P59074 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP4BP1P59074 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP4BP1P59074 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.33■□□□□ 0.85
CHMP4BP1P59074 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP4BP1P59074 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CHMP4BP1P59074 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP4BP1P59074 HLA-A-201ENST00000376802 1334 ntBASIC20.33■□□□□ 0.85
CHMP4BP1P59074 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP4BP1P59074 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CHMP4BP1P59074 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP4BP1P59074 KRT89P-201ENST00000620027 1478 ntBASIC20.33■□□□□ 0.85
CHMP4BP1P59074 AC009102.3-201ENST00000623118 1491 ntBASIC20.33■□□□□ 0.85
CHMP4BP1P59074 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP4BP1P59074 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP4BP1P59074 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
CHMP4BP1P59074 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP4BP1P59074 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP4BP1P59074 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CHMP4BP1P59074 MIR149-201ENST00000384879 89 ntBASIC20.33■□□□□ 0.85
CHMP4BP1P59074 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP4BP1P59074 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.33■□□□□ 0.85
CHMP4BP1P59074 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.33■□□□□ 0.85
CHMP4BP1P59074 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.33■□□□□ 0.85
CHMP4BP1P59074 REXO1L6P-202ENST00000619970 1078 ntBASIC20.33■□□□□ 0.85
CHMP4BP1P59074 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.33■□□□□ 0.85
CHMP4BP1P59074 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
CHMP4BP1P59074 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHMP4BP1P59074 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHMP4BP1P59074 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CHMP4BP1P59074 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CHMP4BP1P59074 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP4BP1P59074 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP4BP1P59074 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CHMP4BP1P59074 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.32■□□□□ 0.84
CHMP4BP1P59074 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.32■□□□□ 0.84
CHMP4BP1P59074 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP4BP1P59074 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.32■□□□□ 0.84
CHMP4BP1P59074 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.32■□□□□ 0.84
CHMP4BP1P59074 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.32■□□□□ 0.84
CHMP4BP1P59074 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP4BP1P59074 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP4BP1P59074 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP4BP1P59074 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP4BP1P59074 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP4BP1P59074 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP4BP1P59074 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP4BP1P59074 FAM197Y8-203ENST00000450145 560 ntBASIC20.32■□□□□ 0.84
CHMP4BP1P59074 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.32■□□□□ 0.84
CHMP4BP1P59074 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.32■□□□□ 0.84
CHMP4BP1P59074 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.32■□□□□ 0.84
CHMP4BP1P59074 BNIP3P18-201ENST00000593976 575 ntBASIC20.32■□□□□ 0.84
CHMP4BP1P59074 TP73-AS1-207ENST00000624167 988 ntBASIC20.32■□□□□ 0.84
CHMP4BP1P59074 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP4BP1P59074 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP4BP1P59074 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.32■□□□□ 0.84
CHMP4BP1P59074 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP4BP1P59074 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP4BP1P59074 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 MIR5100-201ENST00000579544 119 ntBASIC20.31■□□□□ 0.84
CHMP4BP1P59074 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 AC083906.6-201ENST00000641366 219 ntBASIC20.31■□□□□ 0.84
CHMP4BP1P59074 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CHMP4BP1P59074 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHMP4BP1P59074 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms