Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.25□□□□□ -0.29
CMC4P56277 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.25□□□□□ -0.29
CMC4P56277 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CMC4P56277 AL354751.1-201ENST00000412768 1863 ntBASIC13.25□□□□□ -0.29
CMC4P56277 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.25□□□□□ -0.29
CMC4P56277 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.25□□□□□ -0.29
CMC4P56277 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.25□□□□□ -0.29
CMC4P56277 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CMC4P56277 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 MYCLP1-201ENST00000372451 1075 ntBASIC13.25□□□□□ -0.29
CMC4P56277 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.25□□□□□ -0.29
CMC4P56277 IGHV3-47-201ENST00000425060 335 ntBASIC13.25□□□□□ -0.29
CMC4P56277 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.25□□□□□ -0.29
CMC4P56277 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CMC4P56277 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.25□□□□□ -0.29
CMC4P56277 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.25□□□□□ -0.29
CMC4P56277 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.25□□□□□ -0.29
CMC4P56277 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.25□□□□□ -0.29
CMC4P56277 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.25□□□□□ -0.29
CMC4P56277 AC111152.3-201ENST00000569699 673 ntBASIC13.25□□□□□ -0.29
CMC4P56277 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.25□□□□□ -0.29
CMC4P56277 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CMC4P56277 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.25□□□□□ -0.29
CMC4P56277 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
CMC4P56277 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CMC4P56277 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.25□□□□□ -0.29
CMC4P56277 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13.25□□□□□ -0.29
CMC4P56277 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.25□□□□□ -0.29
CMC4P56277 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC13.25□□□□□ -0.29
CMC4P56277 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CMC4P56277 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CMC4P56277 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.25□□□□□ -0.29
CMC4P56277 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.25□□□□□ -0.29
CMC4P56277 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CMC4P56277 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
CMC4P56277 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CMC4P56277 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CMC4P56277 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CMC4P56277 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CMC4P56277 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC13.24□□□□□ -0.29
CMC4P56277 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CMC4P56277 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CMC4P56277 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CMC4P56277 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CMC4P56277 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CMC4P56277 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC13.24□□□□□ -0.29
CMC4P56277 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CMC4P56277 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CMC4P56277 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CMC4P56277 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CMC4P56277 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
CMC4P56277 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CMC4P56277 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CMC4P56277 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CMC4P56277 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CMC4P56277 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CMC4P56277 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CMC4P56277 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.24□□□□□ -0.29
CMC4P56277 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CMC4P56277 KRT18P56-201ENST00000507275 550 ntBASIC13.24□□□□□ -0.29
CMC4P56277 IGHV3-52-201ENST00000519770 353 ntBASIC13.24□□□□□ -0.29
CMC4P56277 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.24□□□□□ -0.29
CMC4P56277 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.24□□□□□ -0.29
CMC4P56277 AC099336.1-202ENST00000602961 463 ntBASIC13.24□□□□□ -0.29
CMC4P56277 LINC01451-201ENST00000623792 534 ntBASIC13.24□□□□□ -0.29
CMC4P56277 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CMC4P56277 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CMC4P56277 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.24□□□□□ -0.29
CMC4P56277 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CMC4P56277 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CMC4P56277 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CMC4P56277 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms