Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDE1AP54750 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.71■■□□□ 1.07
PDE1AP54750 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE1AP54750 AP005901.3-202ENST00000581653 237 ntBASIC21.71■■□□□ 1.07
PDE1AP54750 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.71■■□□□ 1.07
PDE1AP54750 AL138831.2-201ENST00000606564 490 ntBASIC21.71■■□□□ 1.07
PDE1AP54750 AL358472.4-201ENST00000633140 710 ntBASIC21.71■■□□□ 1.07
PDE1AP54750 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.71■■□□□ 1.07
PDE1AP54750 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE1AP54750 CEP83-AS1-201ENST00000623122 2482 ntBASIC21.71■■□□□ 1.07
PDE1AP54750 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE1AP54750 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.71■■□□□ 1.07
PDE1AP54750 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE1AP54750 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE1AP54750 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE1AP54750 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE1AP54750 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.71■■□□□ 1.07
PDE1AP54750 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDE1AP54750 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PDE1AP54750 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
PDE1AP54750 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDE1AP54750 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDE1AP54750 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDE1AP54750 AC108860.2-201ENST00000562760 2183 ntBASIC21.7■■□□□ 1.06
PDE1AP54750 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDE1AP54750 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.7■■□□□ 1.06
PDE1AP54750 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.7■■□□□ 1.06
PDE1AP54750 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDE1AP54750 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDE1AP54750 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDE1AP54750 COX5BP2-201ENST00000392354 334 ntBASIC21.7■■□□□ 1.06
PDE1AP54750 TSSC2-201ENST00000450217 709 ntBASIC21.7■■□□□ 1.06
PDE1AP54750 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.7■■□□□ 1.06
PDE1AP54750 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.7■■□□□ 1.06
PDE1AP54750 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.7■■□□□ 1.06
PDE1AP54750 AC010331.1-201ENST00000611423 582 ntBASIC21.7■■□□□ 1.06
PDE1AP54750 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
PDE1AP54750 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDE1AP54750 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDE1AP54750 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDE1AP54750 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
PDE1AP54750 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDE1AP54750 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
PDE1AP54750 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDE1AP54750 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDE1AP54750 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDE1AP54750 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDE1AP54750 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDE1AP54750 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PDE1AP54750 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDE1AP54750 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDE1AP54750 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDE1AP54750 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDE1AP54750 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.69■■□□□ 1.06
PDE1AP54750 AC007967.3-201ENST00000434308 558 ntBASIC21.69■■□□□ 1.06
PDE1AP54750 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.69■■□□□ 1.06
PDE1AP54750 AC011840.4-201ENST00000578471 627 ntBASIC21.69■■□□□ 1.06
PDE1AP54750 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PDE1AP54750 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDE1AP54750 AP000550.4-202ENST00000639755 178 ntBASIC21.69■■□□□ 1.06
PDE1AP54750 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDE1AP54750 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDE1AP54750 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDE1AP54750 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDE1AP54750 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDE1AP54750 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC21.69■■□□□ 1.06
PDE1AP54750 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDE1AP54750 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDE1AP54750 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.69■■□□□ 1.06
PDE1AP54750 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PDE1AP54750 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.68■■□□□ 1.06
PDE1AP54750 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PDE1AP54750 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDE1AP54750 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDE1AP54750 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDE1AP54750 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.68■■□□□ 1.06
PDE1AP54750 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDE1AP54750 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDE1AP54750 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.68■■□□□ 1.06
PDE1AP54750 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.68■■□□□ 1.06
PDE1AP54750 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.68■■□□□ 1.06
PDE1AP54750 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDE1AP54750 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.68■■□□□ 1.06
PDE1AP54750 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDE1AP54750 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.68■■□□□ 1.06
PDE1AP54750 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.68■■□□□ 1.06
PDE1AP54750 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.68■■□□□ 1.06
PDE1AP54750 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.68■■□□□ 1.06
PDE1AP54750 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDE1AP54750 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDE1AP54750 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDE1AP54750 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PDE1AP54750 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.68■■□□□ 1.06
PDE1AP54750 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PDE1AP54750 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PDE1AP54750 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
PDE1AP54750 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDE1AP54750 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDE1AP54750 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDE1AP54750 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms