Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL15A1P39059 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC22.42■■□□□ 1.18
COL15A1P39059 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL15A1P39059 AC135776.1-201ENST00000319817 2481 ntBASIC22.42■■□□□ 1.18
COL15A1P39059 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL15A1P39059 RPS15P9-201ENST00000494093 319 ntBASIC22.42■■□□□ 1.18
COL15A1P39059 IGHV3-65-201ENST00000523210 341 ntBASIC22.42■■□□□ 1.18
COL15A1P39059 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
COL15A1P39059 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC22.42■■□□□ 1.18
COL15A1P39059 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC22.42■■□□□ 1.18
COL15A1P39059 AC008667.4-201ENST00000607370 168 ntBASIC22.42■■□□□ 1.18
COL15A1P39059 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC22.42■■□□□ 1.18
COL15A1P39059 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC22.42■■□□□ 1.18
COL15A1P39059 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL15A1P39059 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL15A1P39059 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL15A1P39059 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL15A1P39059 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC22.42■■□□□ 1.18
COL15A1P39059 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL15A1P39059 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL15A1P39059 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL15A1P39059 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC22.42■■□□□ 1.18
COL15A1P39059 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL15A1P39059 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL15A1P39059 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL15A1P39059 FUT8-AS1-201ENST00000621019 1521 ntBASIC22.41■■□□□ 1.18
COL15A1P39059 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
COL15A1P39059 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC22.41■■□□□ 1.18
COL15A1P39059 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC22.41■■□□□ 1.18
COL15A1P39059 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC22.41■■□□□ 1.18
COL15A1P39059 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC22.41■■□□□ 1.18
COL15A1P39059 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL15A1P39059 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC22.41■■□□□ 1.18
COL15A1P39059 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL15A1P39059 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
COL15A1P39059 FLYWCH1P1-201ENST00000460917 1874 ntBASIC22.41■■□□□ 1.18
COL15A1P39059 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL15A1P39059 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
COL15A1P39059 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC22.41■■□□□ 1.18
COL15A1P39059 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL15A1P39059 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
COL15A1P39059 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC22.41■■□□□ 1.18
COL15A1P39059 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL15A1P39059 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC22.4■■□□□ 1.18
COL15A1P39059 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC22.4■■□□□ 1.18
COL15A1P39059 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC22.4■■□□□ 1.18
COL15A1P39059 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL15A1P39059 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
COL15A1P39059 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC22.4■■□□□ 1.18
COL15A1P39059 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL15A1P39059 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL15A1P39059 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL15A1P39059 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC22.4■■□□□ 1.18
COL15A1P39059 AC254562.1-201ENST00000417586 456 ntBASIC22.4■■□□□ 1.18
COL15A1P39059 HTR5BP-201ENST00000430851 1154 ntBASIC22.4■■□□□ 1.18
COL15A1P39059 VN2R19P-201ENST00000442399 1052 ntBASIC22.4■■□□□ 1.18
COL15A1P39059 S100A2-206ENST00000497140 697 ntTSL 2 BASIC22.4■■□□□ 1.18
COL15A1P39059 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL15A1P39059 RFPL4AP1-201ENST00000530883 850 ntBASIC22.4■■□□□ 1.18
COL15A1P39059 CIPC-205ENST00000555437 566 ntTSL 3 BASIC22.4■■□□□ 1.18
COL15A1P39059 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
COL15A1P39059 AC019129.2-201ENST00000609837 1235 ntBASIC22.4■■□□□ 1.18
COL15A1P39059 AL078644.1-201ENST00000609881 752 ntBASIC22.4■■□□□ 1.18
COL15A1P39059 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL15A1P39059 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC22.4■■□□□ 1.18
COL15A1P39059 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
COL15A1P39059 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL15A1P39059 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL15A1P39059 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL15A1P39059 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL15A1P39059 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL15A1P39059 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL15A1P39059 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL15A1P39059 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL15A1P39059 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL15A1P39059 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC22.4■■□□□ 1.18
COL15A1P39059 AC003669.1-201ENST00000334569 611 ntBASIC22.39■■□□□ 1.18
COL15A1P39059 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
COL15A1P39059 IGLL3P-201ENST00000412472 434 ntBASIC22.39■■□□□ 1.18
COL15A1P39059 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
COL15A1P39059 MAL2-202ENST00000531508 892 ntTSL 3 BASIC22.39■■□□□ 1.18
COL15A1P39059 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC22.39■■□□□ 1.18
COL15A1P39059 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC22.39■■□□□ 1.18
COL15A1P39059 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC22.39■■□□□ 1.18
COL15A1P39059 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC22.39■■□□□ 1.18
COL15A1P39059 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC22.39■■□□□ 1.18
COL15A1P39059 C20orf181-201ENST00000623918 480 ntBASIC22.39■■□□□ 1.18
COL15A1P39059 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
COL15A1P39059 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
COL15A1P39059 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
COL15A1P39059 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
COL15A1P39059 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC22.39■■□□□ 1.17
COL15A1P39059 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC22.39■■□□□ 1.17
COL15A1P39059 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
COL15A1P39059 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL15A1P39059 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL15A1P39059 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL15A1P39059 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC22.39■■□□□ 1.17
COL15A1P39059 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
COL15A1P39059 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms