Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RORAP35398 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.89■□□□□ 0.29
RORAP35398 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.89■□□□□ 0.29
RORAP35398 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.89■□□□□ 0.29
RORAP35398 ABCD1P5-201ENST00000445663 754 ntBASIC16.89■□□□□ 0.29
RORAP35398 AC018712.1-201ENST00000455767 687 ntBASIC16.89■□□□□ 0.29
RORAP35398 AF186996.4-201ENST00000467186 377 ntBASIC16.89■□□□□ 0.29
RORAP35398 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.89■□□□□ 0.29
RORAP35398 AP001005.1-201ENST00000571755 1248 ntBASIC16.89■□□□□ 0.29
RORAP35398 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.89■□□□□ 0.29
RORAP35398 AC148477.8-201ENST00000624298 468 ntBASIC16.89■□□□□ 0.29
RORAP35398 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.89■□□□□ 0.29
RORAP35398 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RORAP35398 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RORAP35398 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RORAP35398 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RORAP35398 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RORAP35398 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RORAP35398 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
RORAP35398 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.89■□□□□ 0.29
RORAP35398 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RORAP35398 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RORAP35398 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RORAP35398 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RORAP35398 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RORAP35398 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RORAP35398 AP005117.1-201ENST00000584346 1413 ntBASIC16.88■□□□□ 0.29
RORAP35398 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
RORAP35398 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RORAP35398 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.88■□□□□ 0.29
RORAP35398 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RORAP35398 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
RORAP35398 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
RORAP35398 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
RORAP35398 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RORAP35398 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.88■□□□□ 0.29
RORAP35398 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RORAP35398 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RORAP35398 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RORAP35398 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.88■□□□□ 0.29
RORAP35398 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RORAP35398 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RORAP35398 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RORAP35398 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.88■□□□□ 0.29
RORAP35398 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.88■□□□□ 0.29
RORAP35398 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.88■□□□□ 0.29
RORAP35398 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.88■□□□□ 0.29
RORAP35398 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.88■□□□□ 0.29
RORAP35398 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.88■□□□□ 0.29
RORAP35398 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.88■□□□□ 0.29
RORAP35398 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
RORAP35398 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RORAP35398 BX640515.1-201ENST00000617215 977 ntBASIC16.88■□□□□ 0.29
RORAP35398 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RORAP35398 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RORAP35398 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RORAP35398 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RORAP35398 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.88■□□□□ 0.29
RORAP35398 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RORAP35398 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RORAP35398 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.88■□□□□ 0.29
RORAP35398 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RORAP35398 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.88■□□□□ 0.29
RORAP35398 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.88■□□□□ 0.29
RORAP35398 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RORAP35398 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RORAP35398 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RORAP35398 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.87■□□□□ 0.29
RORAP35398 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RORAP35398 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RORAP35398 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RORAP35398 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RORAP35398 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RORAP35398 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RORAP35398 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RORAP35398 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RORAP35398 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RORAP35398 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RORAP35398 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.87■□□□□ 0.29
RORAP35398 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.87■□□□□ 0.29
RORAP35398 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
RORAP35398 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
RORAP35398 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.87■□□□□ 0.29
RORAP35398 AL031284.1-201ENST00000419297 478 ntBASIC16.87■□□□□ 0.29
RORAP35398 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RORAP35398 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RORAP35398 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.87■□□□□ 0.29
RORAP35398 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.87■□□□□ 0.29
RORAP35398 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.87■□□□□ 0.29
RORAP35398 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RORAP35398 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.87■□□□□ 0.29
RORAP35398 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RORAP35398 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RORAP35398 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RORAP35398 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
RORAP35398 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RORAP35398 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RORAP35398 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
RORAP35398 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.86■□□□□ 0.29
RORAP35398 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms