Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM21P19474 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM21P19474 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TRIM21P19474 AC141586.5-201ENST00000624546 2050 ntBASIC19.65■□□□□ 0.74
TRIM21P19474 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM21P19474 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM21P19474 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM21P19474 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
TRIM21P19474 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM21P19474 AL359075.1-203ENST00000462729 1002 ntBASIC19.65■□□□□ 0.74
TRIM21P19474 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM21P19474 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM21P19474 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM21P19474 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TRIM21P19474 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM21P19474 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM21P19474 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM21P19474 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
TRIM21P19474 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM21P19474 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.65■□□□□ 0.74
TRIM21P19474 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM21P19474 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM21P19474 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM21P19474 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.65■□□□□ 0.74
TRIM21P19474 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM21P19474 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TRIM21P19474 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM21P19474 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TRIM21P19474 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRIM21P19474 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM21P19474 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM21P19474 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM21P19474 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.64■□□□□ 0.74
TRIM21P19474 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.64■□□□□ 0.74
TRIM21P19474 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM21P19474 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM21P19474 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM21P19474 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM21P19474 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM21P19474 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM21P19474 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM21P19474 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM21P19474 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.64■□□□□ 0.73
TRIM21P19474 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM21P19474 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TRIM21P19474 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM21P19474 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM21P19474 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TRIM21P19474 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM21P19474 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM21P19474 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM21P19474 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TRIM21P19474 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM21P19474 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
TRIM21P19474 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM21P19474 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRIM21P19474 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM21P19474 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM21P19474 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM21P19474 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.63■□□□□ 0.73
TRIM21P19474 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TRIM21P19474 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM21P19474 AL355312.1-201ENST00000407115 2176 ntBASIC19.63■□□□□ 0.73
TRIM21P19474 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM21P19474 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM21P19474 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM21P19474 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM21P19474 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM21P19474 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM21P19474 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM21P19474 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM21P19474 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TRIM21P19474 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM21P19474 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM21P19474 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.63■□□□□ 0.73
TRIM21P19474 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.63■□□□□ 0.73
TRIM21P19474 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM21P19474 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.63■□□□□ 0.73
TRIM21P19474 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
TRIM21P19474 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM21P19474 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM21P19474 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM21P19474 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
TRIM21P19474 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRIM21P19474 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM21P19474 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM21P19474 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM21P19474 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.63■□□□□ 0.73
TRIM21P19474 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM21P19474 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TRIM21P19474 AC132938.6-201ENST00000623828 1655 ntBASIC19.62■□□□□ 0.73
TRIM21P19474 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM21P19474 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM21P19474 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM21P19474 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM21P19474 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRIM21P19474 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM21P19474 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.62■□□□□ 0.73
TRIM21P19474 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM21P19474 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms