Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RARBP10826 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RARBP10826 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
RARBP10826 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RARBP10826 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.86■□□□□ 0.77
RARBP10826 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RARBP10826 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RARBP10826 COX5BP2-201ENST00000392354 334 ntBASIC19.86■□□□□ 0.77
RARBP10826 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.86■□□□□ 0.77
RARBP10826 AC254562.1-201ENST00000417586 456 ntBASIC19.86■□□□□ 0.77
RARBP10826 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.86■□□□□ 0.77
RARBP10826 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.86■□□□□ 0.77
RARBP10826 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RARBP10826 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.86■□□□□ 0.77
RARBP10826 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.86■□□□□ 0.77
RARBP10826 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.86■□□□□ 0.77
RARBP10826 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RARBP10826 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RARBP10826 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
RARBP10826 AC006504.4-201ENST00000592118 1568 ntBASIC19.86■□□□□ 0.77
RARBP10826 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.86■□□□□ 0.77
RARBP10826 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RARBP10826 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RARBP10826 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RARBP10826 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RARBP10826 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RARBP10826 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RARBP10826 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RARBP10826 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RARBP10826 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RARBP10826 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RARBP10826 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RARBP10826 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RARBP10826 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RARBP10826 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.85■□□□□ 0.77
RARBP10826 VN2R19P-201ENST00000442399 1052 ntBASIC19.85■□□□□ 0.77
RARBP10826 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RARBP10826 AC108073.2-201ENST00000464002 357 ntBASIC19.85■□□□□ 0.77
RARBP10826 C20orf181-201ENST00000623918 480 ntBASIC19.85■□□□□ 0.77
RARBP10826 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.85■□□□□ 0.77
RARBP10826 AC092865.6-201ENST00000642101 219 ntBASIC19.85■□□□□ 0.77
RARBP10826 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.85■□□□□ 0.77
RARBP10826 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RARBP10826 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RARBP10826 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RARBP10826 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RARBP10826 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RARBP10826 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RARBP10826 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RARBP10826 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RARBP10826 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.85■□□□□ 0.77
RARBP10826 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RARBP10826 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.84■□□□□ 0.77
RARBP10826 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RARBP10826 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.84■□□□□ 0.77
RARBP10826 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RARBP10826 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RARBP10826 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RARBP10826 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RARBP10826 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RARBP10826 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RARBP10826 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
RARBP10826 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.84■□□□□ 0.77
RARBP10826 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RARBP10826 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.84■□□□□ 0.77
RARBP10826 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.84■□□□□ 0.77
RARBP10826 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RARBP10826 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RARBP10826 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RARBP10826 NCF1C-201ENST00000438382 1427 ntBASIC19.84■□□□□ 0.77
RARBP10826 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RARBP10826 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RARBP10826 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
RARBP10826 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RARBP10826 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.83■□□□□ 0.77
RARBP10826 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.83■□□□□ 0.77
RARBP10826 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.83■□□□□ 0.77
RARBP10826 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RARBP10826 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RARBP10826 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RARBP10826 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RARBP10826 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.83■□□□□ 0.77
RARBP10826 CYMP-203ENST00000474680 1263 ntBASIC19.83■□□□□ 0.77
RARBP10826 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.83■□□□□ 0.77
RARBP10826 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.83■□□□□ 0.77
RARBP10826 RFPL4AP1-201ENST00000530883 850 ntBASIC19.83■□□□□ 0.77
RARBP10826 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.83■□□□□ 0.77
RARBP10826 AC018845.2-201ENST00000568326 409 ntBASIC19.83■□□□□ 0.77
RARBP10826 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.83■□□□□ 0.77
RARBP10826 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RARBP10826 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RARBP10826 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RARBP10826 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
RARBP10826 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
RARBP10826 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RARBP10826 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.83■□□□□ 0.76
RARBP10826 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RARBP10826 SIRPAP1-201ENST00000448467 1770 ntBASIC19.83■□□□□ 0.76
RARBP10826 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RARBP10826 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms