Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPRFP10586 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPRFP10586 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.24■□□□□ 0.83
PTPRFP10586 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPRFP10586 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPRFP10586 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPRFP10586 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20.24■□□□□ 0.83
PTPRFP10586 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.24■□□□□ 0.83
PTPRFP10586 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.24■□□□□ 0.83
PTPRFP10586 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.24■□□□□ 0.83
PTPRFP10586 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPRFP10586 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PTPRFP10586 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPRFP10586 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPRFP10586 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTPRFP10586 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PTPRFP10586 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTPRFP10586 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
PTPRFP10586 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPRFP10586 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTPRFP10586 AL035633.1-201ENST00000406139 838 ntBASIC20.23■□□□□ 0.83
PTPRFP10586 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.23■□□□□ 0.83
PTPRFP10586 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.23■□□□□ 0.83
PTPRFP10586 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PTPRFP10586 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.23■□□□□ 0.83
PTPRFP10586 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.23■□□□□ 0.83
PTPRFP10586 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPRFP10586 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPRFP10586 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPRFP10586 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.23■□□□□ 0.83
PTPRFP10586 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTPRFP10586 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.23■□□□□ 0.83
PTPRFP10586 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPRFP10586 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
PTPRFP10586 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.23■□□□□ 0.83
PTPRFP10586 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
PTPRFP10586 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.23■□□□□ 0.83
PTPRFP10586 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.23■□□□□ 0.83
PTPRFP10586 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.23■□□□□ 0.83
PTPRFP10586 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
PTPRFP10586 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPRFP10586 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPRFP10586 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPRFP10586 BCAR1-209ENST00000546196 1340 ntBASIC20.22■□□□□ 0.83
PTPRFP10586 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.22■□□□□ 0.83
PTPRFP10586 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPRFP10586 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPRFP10586 AC004461.1-201ENST00000412461 403 ntBASIC20.22■□□□□ 0.83
PTPRFP10586 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPRFP10586 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.22■□□□□ 0.83
PTPRFP10586 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.22■□□□□ 0.83
PTPRFP10586 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.22■□□□□ 0.83
PTPRFP10586 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.22■□□□□ 0.83
PTPRFP10586 AC007064.4-201ENST00000637740 555 ntBASIC20.22■□□□□ 0.83
PTPRFP10586 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPRFP10586 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPRFP10586 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPRFP10586 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPRFP10586 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.22■□□□□ 0.83
PTPRFP10586 WIZP1-201ENST00000531444 2299 ntBASIC20.22■□□□□ 0.83
PTPRFP10586 REXO1L11P-201ENST00000620964 1927 ntBASIC20.21■□□□□ 0.83
PTPRFP10586 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPRFP10586 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.21■□□□□ 0.83
PTPRFP10586 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PTPRFP10586 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.21■□□□□ 0.83
PTPRFP10586 MIR3197-201ENST00000582241 73 ntBASIC20.21■□□□□ 0.83
PTPRFP10586 AC099522.2-201ENST00000607001 744 ntBASIC20.21■□□□□ 0.83
PTPRFP10586 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PTPRFP10586 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PTPRFP10586 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.21■□□□□ 0.83
PTPRFP10586 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTPRFP10586 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPRFP10586 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTPRFP10586 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPRFP10586 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
PTPRFP10586 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPRFP10586 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPRFP10586 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPRFP10586 AC109322.1-201ENST00000524499 1264 ntBASIC20.21■□□□□ 0.83
PTPRFP10586 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTPRFP10586 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.21■□□□□ 0.83
PTPRFP10586 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTPRFP10586 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTPRFP10586 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTPRFP10586 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.21■□□□□ 0.83
PTPRFP10586 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PTPRFP10586 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPRFP10586 AC135776.1-201ENST00000319817 2481 ntBASIC20.21■□□□□ 0.83
PTPRFP10586 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
PTPRFP10586 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.2■□□□□ 0.82
PTPRFP10586 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PTPRFP10586 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTPRFP10586 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTPRFP10586 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.2■□□□□ 0.82
PTPRFP10586 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPRFP10586 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
PTPRFP10586 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPRFP10586 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTPRFP10586 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPRFP10586 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms