Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HNRNPCL4P0DMR1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HNRNPCL4P0DMR1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HNRNPCL4P0DMR1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HNRNPCL4P0DMR1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.55■□□□□ 0.24
HNRNPCL4P0DMR1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HNRNPCL4P0DMR1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HNRNPCL4P0DMR1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HNRNPCL4P0DMR1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HNRNPCL4P0DMR1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.55■□□□□ 0.24
HNRNPCL4P0DMR1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 AC108860.2-201ENST00000562760 2183 ntBASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 TSPY12P-201ENST00000421279 868 ntBASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 AC012306.2-201ENST00000609350 630 ntBASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 AC097493.4-201ENST00000641197 219 ntBASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HNRNPCL4P0DMR1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 KRT8P47-201ENST00000604727 1398 ntBASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 SPDYE15P-201ENST00000424157 909 ntBASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 YBX1P2-201ENST00000489612 999 ntBASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 AC139887.4-201ENST00000607877 719 ntBASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 AC073912.3-201ENST00000624414 853 ntBASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HNRNPCL4P0DMR1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HNRNPCL4P0DMR1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HNRNPCL4P0DMR1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HNRNPCL4P0DMR1 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
HNRNPCL4P0DMR1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.52■□□□□ 0.24
HNRNPCL4P0DMR1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.52■□□□□ 0.24
HNRNPCL4P0DMR1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
HNRNPCL4P0DMR1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
HNRNPCL4P0DMR1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HNRNPCL4P0DMR1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HNRNPCL4P0DMR1 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms