Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND1P03886 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
MT-ND1P03886 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.82■□□□□ 0.28
MT-ND1P03886 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND1P03886 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MT-ND1P03886 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-ND1P03886 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-ND1P03886 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-ND1P03886 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.81■□□□□ 0.28
MT-ND1P03886 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MT-ND1P03886 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
MT-ND1P03886 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.81■□□□□ 0.28
MT-ND1P03886 CICP6-201ENST00000457191 2729 ntBASIC16.81■□□□□ 0.28
MT-ND1P03886 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-ND1P03886 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-ND1P03886 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MT-ND1P03886 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
MT-ND1P03886 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MT-ND1P03886 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MT-ND1P03886 CRYGFP-201ENST00000418459 633 ntBASIC16.81■□□□□ 0.28
MT-ND1P03886 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-ND1P03886 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.81■□□□□ 0.28
MT-ND1P03886 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.81■□□□□ 0.28
MT-ND1P03886 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.81■□□□□ 0.28
MT-ND1P03886 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
MT-ND1P03886 AC026471.5-201ENST00000615068 467 ntBASIC16.81■□□□□ 0.28
MT-ND1P03886 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MT-ND1P03886 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-ND1P03886 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-ND1P03886 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.81■□□□□ 0.28
MT-ND1P03886 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-ND1P03886 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.81■□□□□ 0.28
MT-ND1P03886 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-ND1P03886 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-ND1P03886 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MT-ND1P03886 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-ND1P03886 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.81■□□□□ 0.28
MT-ND1P03886 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-ND1P03886 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
MT-ND1P03886 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
MT-ND1P03886 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
MT-ND1P03886 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-ND1P03886 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-ND1P03886 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-ND1P03886 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-ND1P03886 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-ND1P03886 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.8■□□□□ 0.28
MT-ND1P03886 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
MT-ND1P03886 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-ND1P03886 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.8■□□□□ 0.28
MT-ND1P03886 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-ND1P03886 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MT-ND1P03886 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.8■□□□□ 0.28
MT-ND1P03886 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.8■□□□□ 0.28
MT-ND1P03886 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
MT-ND1P03886 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-ND1P03886 AC132938.6-201ENST00000623828 1655 ntBASIC16.8■□□□□ 0.28
MT-ND1P03886 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-ND1P03886 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MT-ND1P03886 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-ND1P03886 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-ND1P03886 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.8■□□□□ 0.28
MT-ND1P03886 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-ND1P03886 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-ND1P03886 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-ND1P03886 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MT-ND1P03886 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
MT-ND1P03886 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-ND1P03886 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
MT-ND1P03886 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
MT-ND1P03886 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.79■□□□□ 0.28
MT-ND1P03886 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
MT-ND1P03886 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-ND1P03886 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.79■□□□□ 0.28
MT-ND1P03886 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-ND1P03886 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-ND1P03886 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
MT-ND1P03886 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.79■□□□□ 0.28
MT-ND1P03886 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-ND1P03886 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-ND1P03886 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.79■□□□□ 0.28
MT-ND1P03886 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-ND1P03886 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MT-ND1P03886 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-ND1P03886 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-ND1P03886 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
MT-ND1P03886 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
MT-ND1P03886 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-ND1P03886 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
MT-ND1P03886 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MT-ND1P03886 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MT-ND1P03886 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.79■□□□□ 0.28
MT-ND1P03886 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.79■□□□□ 0.28
MT-ND1P03886 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.79■□□□□ 0.28
MT-ND1P03886 AP005242.2-201ENST00000580065 1175 ntBASIC16.79■□□□□ 0.28
MT-ND1P03886 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
MT-ND1P03886 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.79■□□□□ 0.28
MT-ND1P03886 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MT-ND1P03886 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
MT-ND1P03886 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms