Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.58■□□□□ 0.73
CD4P01730 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CD4P01730 AC093503.3-201ENST00000624917 2352 ntBASIC19.58■□□□□ 0.73
CD4P01730 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CD4P01730 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CD4P01730 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CD4P01730 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CD4P01730 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CD4P01730 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CD4P01730 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CD4P01730 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CD4P01730 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CD4P01730 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.58■□□□□ 0.72
CD4P01730 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.58■□□□□ 0.72
CD4P01730 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
CD4P01730 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.58■□□□□ 0.72
CD4P01730 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.58■□□□□ 0.72
CD4P01730 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.58■□□□□ 0.72
CD4P01730 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.58■□□□□ 0.72
CD4P01730 SNHG9-202ENST00000564014 471 ntBASIC19.58■□□□□ 0.72
CD4P01730 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.58■□□□□ 0.72
CD4P01730 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.58■□□□□ 0.72
CD4P01730 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.58■□□□□ 0.72
CD4P01730 C20orf181-201ENST00000623918 480 ntBASIC19.58■□□□□ 0.72
CD4P01730 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.58■□□□□ 0.72
CD4P01730 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CD4P01730 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CD4P01730 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.58■□□□□ 0.72
CD4P01730 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CD4P01730 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CD4P01730 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CD4P01730 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
CD4P01730 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.58■□□□□ 0.72
CD4P01730 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CD4P01730 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
CD4P01730 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.57■□□□□ 0.72
CD4P01730 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CD4P01730 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD4P01730 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD4P01730 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CD4P01730 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.57■□□□□ 0.72
CD4P01730 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD4P01730 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CD4P01730 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CD4P01730 CRYGEP-201ENST00000412192 528 ntBASIC19.57■□□□□ 0.72
CD4P01730 AC103564.2-201ENST00000432853 1299 ntBASIC19.57■□□□□ 0.72
CD4P01730 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
CD4P01730 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CD4P01730 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.57■□□□□ 0.72
CD4P01730 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.57■□□□□ 0.72
CD4P01730 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.57■□□□□ 0.72
CD4P01730 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD4P01730 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.57■□□□□ 0.72
CD4P01730 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CD4P01730 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD4P01730 AC006504.4-201ENST00000592118 1568 ntBASIC19.57■□□□□ 0.72
CD4P01730 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.56■□□□□ 0.72
CD4P01730 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD4P01730 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD4P01730 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.56■□□□□ 0.72
CD4P01730 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD4P01730 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD4P01730 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD4P01730 AL138781.2-201ENST00000617896 1843 ntBASIC19.56■□□□□ 0.72
CD4P01730 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.56■□□□□ 0.72
CD4P01730 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD4P01730 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD4P01730 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
CD4P01730 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD4P01730 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.56■□□□□ 0.72
CD4P01730 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD4P01730 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CD4P01730 ELK2BP-201ENST00000415014 1224 ntBASIC19.56■□□□□ 0.72
CD4P01730 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD4P01730 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.56■□□□□ 0.72
CD4P01730 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CD4P01730 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.56■□□□□ 0.72
CD4P01730 AC073592.5-201ENST00000624854 528 ntBASIC19.56■□□□□ 0.72
CD4P01730 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD4P01730 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD4P01730 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD4P01730 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.56■□□□□ 0.72
CD4P01730 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD4P01730 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.56■□□□□ 0.72
CD4P01730 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD4P01730 KRT8P47-201ENST00000604727 1398 ntBASIC19.56■□□□□ 0.72
CD4P01730 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.56■□□□□ 0.72
CD4P01730 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD4P01730 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD4P01730 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.55■□□□□ 0.72
CD4P01730 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD4P01730 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD4P01730 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD4P01730 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
CD4P01730 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.55■□□□□ 0.72
CD4P01730 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CD4P01730 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CD4P01730 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CD4P01730 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CD4P01730 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms