Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.11□□□□□ -0.15
IFNA1P01562 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.11□□□□□ -0.15
IFNA1P01562 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IFNA1P01562 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.11□□□□□ -0.15
IFNA1P01562 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.11□□□□□ -0.15
IFNA1P01562 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.11□□□□□ -0.15
IFNA1P01562 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.11□□□□□ -0.15
IFNA1P01562 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
IFNA1P01562 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IFNA1P01562 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.11□□□□□ -0.15
IFNA1P01562 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
IFNA1P01562 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
IFNA1P01562 AL121829.2-201ENST00000620908 328 ntBASIC14.11□□□□□ -0.15
IFNA1P01562 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IFNA1P01562 FLJ38576-201ENST00000623820 2459 ntBASIC14.11□□□□□ -0.15
IFNA1P01562 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
IFNA1P01562 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IFNA1P01562 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.11□□□□□ -0.15
IFNA1P01562 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
IFNA1P01562 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.11□□□□□ -0.15
IFNA1P01562 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.11□□□□□ -0.15
IFNA1P01562 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IFNA1P01562 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
IFNA1P01562 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IFNA1P01562 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
IFNA1P01562 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IFNA1P01562 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
IFNA1P01562 SBF1P1-201ENST00000444527 5631 ntBASIC14.11□□□□□ -0.15
IFNA1P01562 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
IFNA1P01562 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.11□□□□□ -0.15
IFNA1P01562 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IFNA1P01562 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IFNA1P01562 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IFNA1P01562 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
IFNA1P01562 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IFNA1P01562 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IFNA1P01562 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.1□□□□□ -0.15
IFNA1P01562 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.1□□□□□ -0.15
IFNA1P01562 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
IFNA1P01562 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IFNA1P01562 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
IFNA1P01562 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
IFNA1P01562 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
IFNA1P01562 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
IFNA1P01562 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC14.1□□□□□ -0.15
IFNA1P01562 POU5F1P3-201ENST00000428824 1078 ntBASIC14.1□□□□□ -0.15
IFNA1P01562 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.1□□□□□ -0.15
IFNA1P01562 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.1□□□□□ -0.15
IFNA1P01562 AL139246.5-201ENST00000606645 996 ntBASIC14.1□□□□□ -0.15
IFNA1P01562 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IFNA1P01562 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IFNA1P01562 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IFNA1P01562 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IFNA1P01562 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IFNA1P01562 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IFNA1P01562 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
IFNA1P01562 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IFNA1P01562 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IFNA1P01562 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
IFNA1P01562 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.1□□□□□ -0.15
IFNA1P01562 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IFNA1P01562 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.1□□□□□ -0.15
IFNA1P01562 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.1□□□□□ -0.15
IFNA1P01562 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
IFNA1P01562 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
IFNA1P01562 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
IFNA1P01562 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
IFNA1P01562 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
IFNA1P01562 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.09□□□□□ -0.15
IFNA1P01562 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IFNA1P01562 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
IFNA1P01562 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IFNA1P01562 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
IFNA1P01562 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.09□□□□□ -0.15
IFNA1P01562 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IFNA1P01562 HLA-J-201ENST00000462773 1622 ntBASIC14.09□□□□□ -0.15
IFNA1P01562 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.09□□□□□ -0.15
IFNA1P01562 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
IFNA1P01562 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC14.09□□□□□ -0.15
IFNA1P01562 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IFNA1P01562 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
IFNA1P01562 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.09□□□□□ -0.15
IFNA1P01562 APTR-203ENST00000430801 583 ntTSL 5 BASIC14.09□□□□□ -0.15
IFNA1P01562 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.09□□□□□ -0.15
IFNA1P01562 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.09□□□□□ -0.15
IFNA1P01562 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.09□□□□□ -0.15
IFNA1P01562 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.09□□□□□ -0.15
IFNA1P01562 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
IFNA1P01562 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.09□□□□□ -0.15
IFNA1P01562 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.09□□□□□ -0.15
IFNA1P01562 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.09□□□□□ -0.15
IFNA1P01562 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
IFNA1P01562 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.09□□□□□ -0.15
IFNA1P01562 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
IFNA1P01562 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
IFNA1P01562 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IFNA1P01562 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
IFNA1P01562 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IFNA1P01562 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
IFNA1P01562 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms