Protein–RNA interactions for Protein: O75387

SLC43A1, Large neutral amino acids transporter small subunit 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1O75387 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC43A1O75387 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC43A1O75387 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC43A1O75387 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC43A1O75387 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC43A1O75387 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC43A1O75387 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC43A1O75387 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SLC43A1O75387 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SLC43A1O75387 AL118508.1-201ENST00000613502 2345 ntBASIC16.16■□□□□ 0.18
SLC43A1O75387 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC43A1O75387 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC43A1O75387 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC43A1O75387 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC43A1O75387 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC43A1O75387 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC43A1O75387 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC43A1O75387 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.16■□□□□ 0.18
SLC43A1O75387 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC43A1O75387 AC024563.2-201ENST00000603282 481 ntBASIC16.16■□□□□ 0.18
SLC43A1O75387 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC43A1O75387 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC43A1O75387 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC43A1O75387 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC43A1O75387 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC43A1O75387 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC43A1O75387 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC43A1O75387 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC43A1O75387 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC43A1O75387 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC43A1O75387 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC43A1O75387 LINC01126-201ENST00000623515 1646 ntBASIC16.16■□□□□ 0.18
SLC43A1O75387 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
SLC43A1O75387 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC43A1O75387 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC43A1O75387 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC43A1O75387 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC43A1O75387 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC43A1O75387 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC43A1O75387 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC43A1O75387 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC43A1O75387 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SLC43A1O75387 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC43A1O75387 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC43A1O75387 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SLC43A1O75387 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC43A1O75387 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC43A1O75387 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC43A1O75387 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC43A1O75387 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC43A1O75387 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
SLC43A1O75387 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC43A1O75387 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC43A1O75387 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC43A1O75387 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC43A1O75387 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SLC43A1O75387 HLA-F-220ENST00000434407 884 ntBASIC16.15■□□□□ 0.18
SLC43A1O75387 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC43A1O75387 AC092597.1-201ENST00000487352 616 ntBASIC16.15■□□□□ 0.18
SLC43A1O75387 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC43A1O75387 LINC01311-201ENST00000565162 1445 ntBASIC16.15■□□□□ 0.18
SLC43A1O75387 AC018695.7-201ENST00000624587 2492 ntBASIC16.15■□□□□ 0.18
SLC43A1O75387 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC43A1O75387 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC43A1O75387 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SLC43A1O75387 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC43A1O75387 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC43A1O75387 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SLC43A1O75387 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC43A1O75387 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC43A1O75387 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC43A1O75387 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
SLC43A1O75387 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SLC43A1O75387 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SLC43A1O75387 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
SLC43A1O75387 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC43A1O75387 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC43A1O75387 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC43A1O75387 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC43A1O75387 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC43A1O75387 NKILA-202ENST00000614771 2598 ntBASIC16.14■□□□□ 0.17
SLC43A1O75387 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SLC43A1O75387 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC43A1O75387 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
SLC43A1O75387 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC43A1O75387 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC43A1O75387 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.14■□□□□ 0.17
SLC43A1O75387 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC43A1O75387 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC43A1O75387 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SLC43A1O75387 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
SLC43A1O75387 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.14■□□□□ 0.17
SLC43A1O75387 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC43A1O75387 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC43A1O75387 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC43A1O75387 REXO1L9P-201ENST00000604264 2108 ntBASIC16.14■□□□□ 0.17
SLC43A1O75387 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC43A1O75387 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC43A1O75387 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC43A1O75387 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms