Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TSPAN3O60637 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.34■□□□□ 0.53
TSPAN3O60637 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TSPAN3O60637 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TSPAN3O60637 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.33■□□□□ 0.53
TSPAN3O60637 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TSPAN3O60637 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TSPAN3O60637 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TSPAN3O60637 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TSPAN3O60637 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.33■□□□□ 0.53
TSPAN3O60637 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.33■□□□□ 0.53
TSPAN3O60637 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
TSPAN3O60637 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TSPAN3O60637 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TSPAN3O60637 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TSPAN3O60637 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.33■□□□□ 0.52
TSPAN3O60637 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TSPAN3O60637 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TSPAN3O60637 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TSPAN3O60637 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TSPAN3O60637 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
TSPAN3O60637 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TSPAN3O60637 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TSPAN3O60637 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TSPAN3O60637 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.33■□□□□ 0.52
TSPAN3O60637 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.33■□□□□ 0.52
TSPAN3O60637 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.33■□□□□ 0.52
TSPAN3O60637 MTDHP3-201ENST00000594186 672 ntBASIC18.33■□□□□ 0.52
TSPAN3O60637 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.33■□□□□ 0.52
TSPAN3O60637 AC008608.2-201ENST00000606089 416 ntBASIC18.33■□□□□ 0.52
TSPAN3O60637 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.33■□□□□ 0.52
TSPAN3O60637 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.33■□□□□ 0.52
TSPAN3O60637 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TSPAN3O60637 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TSPAN3O60637 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TSPAN3O60637 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TSPAN3O60637 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TSPAN3O60637 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TSPAN3O60637 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TSPAN3O60637 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.33■□□□□ 0.52
TSPAN3O60637 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.33■□□□□ 0.52
TSPAN3O60637 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TSPAN3O60637 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.32■□□□□ 0.52
TSPAN3O60637 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TSPAN3O60637 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.32■□□□□ 0.52
TSPAN3O60637 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.32■□□□□ 0.52
TSPAN3O60637 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TSPAN3O60637 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TSPAN3O60637 AC097374.2-201ENST00000618617 1306 ntBASIC18.32■□□□□ 0.52
TSPAN3O60637 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TSPAN3O60637 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TSPAN3O60637 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TSPAN3O60637 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.32■□□□□ 0.52
TSPAN3O60637 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TSPAN3O60637 FAM220CP-201ENST00000395253 831 ntBASIC18.32■□□□□ 0.52
TSPAN3O60637 MRPL3P1-201ENST00000400109 1033 ntBASIC18.32■□□□□ 0.52
TSPAN3O60637 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TSPAN3O60637 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.32■□□□□ 0.52
TSPAN3O60637 AP002469.2-201ENST00000531724 424 ntBASIC18.32■□□□□ 0.52
TSPAN3O60637 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.32■□□□□ 0.52
TSPAN3O60637 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
TSPAN3O60637 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.32■□□□□ 0.52
TSPAN3O60637 TP73-AS1-207ENST00000624167 988 ntBASIC18.32■□□□□ 0.52
TSPAN3O60637 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TSPAN3O60637 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TSPAN3O60637 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.32■□□□□ 0.52
TSPAN3O60637 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.32■□□□□ 0.52
TSPAN3O60637 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.32■□□□□ 0.52
TSPAN3O60637 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TSPAN3O60637 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TSPAN3O60637 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TSPAN3O60637 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TSPAN3O60637 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN3O60637 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.31■□□□□ 0.52
TSPAN3O60637 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TSPAN3O60637 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN3O60637 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN3O60637 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN3O60637 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.31■□□□□ 0.52
TSPAN3O60637 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN3O60637 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TSPAN3O60637 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN3O60637 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN3O60637 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN3O60637 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN3O60637 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN3O60637 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN3O60637 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN3O60637 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.31■□□□□ 0.52
TSPAN3O60637 AC096633.1-201ENST00000422446 749 ntBASIC18.31■□□□□ 0.52
TSPAN3O60637 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.31■□□□□ 0.52
TSPAN3O60637 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
TSPAN3O60637 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.31■□□□□ 0.52
TSPAN3O60637 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.31■□□□□ 0.52
TSPAN3O60637 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.31■□□□□ 0.52
TSPAN3O60637 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.31■□□□□ 0.52
TSPAN3O60637 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN3O60637 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN3O60637 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN3O60637 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms