Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.09■□□□□ 0.17
SURF4O15260 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.09■□□□□ 0.17
SURF4O15260 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
SURF4O15260 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SURF4O15260 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SURF4O15260 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SURF4O15260 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SURF4O15260 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SURF4O15260 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.09■□□□□ 0.17
SURF4O15260 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.09■□□□□ 0.17
SURF4O15260 AL512604.3-201ENST00000569583 964 ntBASIC16.09■□□□□ 0.17
SURF4O15260 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SURF4O15260 AC133561.5-201ENST00000635547 218 ntBASIC16.09■□□□□ 0.17
SURF4O15260 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SURF4O15260 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
SURF4O15260 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SURF4O15260 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SURF4O15260 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SURF4O15260 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.09■□□□□ 0.17
SURF4O15260 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SURF4O15260 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SURF4O15260 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SURF4O15260 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SURF4O15260 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SURF4O15260 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SURF4O15260 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
SURF4O15260 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SURF4O15260 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.08■□□□□ 0.17
SURF4O15260 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SURF4O15260 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.17
SURF4O15260 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
SURF4O15260 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.08■□□□□ 0.17
SURF4O15260 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
SURF4O15260 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SURF4O15260 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SURF4O15260 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.08■□□□□ 0.16
SURF4O15260 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
SURF4O15260 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SURF4O15260 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.08■□□□□ 0.16
SURF4O15260 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.08■□□□□ 0.16
SURF4O15260 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SURF4O15260 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SURF4O15260 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.08■□□□□ 0.16
SURF4O15260 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SURF4O15260 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
SURF4O15260 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SURF4O15260 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.08■□□□□ 0.16
SURF4O15260 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SURF4O15260 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SURF4O15260 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SURF4O15260 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.08■□□□□ 0.16
SURF4O15260 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.08■□□□□ 0.16
SURF4O15260 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.08■□□□□ 0.16
SURF4O15260 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.08■□□□□ 0.16
SURF4O15260 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.08■□□□□ 0.16
SURF4O15260 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SURF4O15260 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SURF4O15260 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SURF4O15260 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SURF4O15260 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SURF4O15260 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SURF4O15260 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SURF4O15260 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.08■□□□□ 0.16
SURF4O15260 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SURF4O15260 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SURF4O15260 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SURF4O15260 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SURF4O15260 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SURF4O15260 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.07■□□□□ 0.16
SURF4O15260 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SURF4O15260 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SURF4O15260 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SURF4O15260 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SURF4O15260 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SURF4O15260 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SURF4O15260 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.07■□□□□ 0.16
SURF4O15260 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SURF4O15260 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SURF4O15260 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.07■□□□□ 0.16
SURF4O15260 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.07■□□□□ 0.16
SURF4O15260 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.07■□□□□ 0.16
SURF4O15260 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SURF4O15260 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.07■□□□□ 0.16
SURF4O15260 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.07■□□□□ 0.16
SURF4O15260 MIR3917-201ENST00000580971 93 ntBASIC16.07■□□□□ 0.16
SURF4O15260 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.07■□□□□ 0.16
SURF4O15260 AC145285.6-201ENST00000604632 637 ntBASIC16.07■□□□□ 0.16
SURF4O15260 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
SURF4O15260 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SURF4O15260 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SURF4O15260 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SURF4O15260 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SURF4O15260 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SURF4O15260 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SURF4O15260 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.07■□□□□ 0.16
SURF4O15260 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SURF4O15260 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SURF4O15260 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SURF4O15260 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SURF4O15260 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms