Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD9O15198 AC132938.6-201ENST00000623828 1655 ntBASIC16.18■□□□□ 0.18
SMAD9O15198 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SMAD9O15198 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD9O15198 NOC2LP2-201ENST00000407594 1944 ntBASIC16.18■□□□□ 0.18
SMAD9O15198 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.18■□□□□ 0.18
SMAD9O15198 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD9O15198 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD9O15198 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD9O15198 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD9O15198 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD9O15198 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD9O15198 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD9O15198 KRT8P26-201ENST00000534154 1276 ntBASIC16.18■□□□□ 0.18
SMAD9O15198 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SMAD9O15198 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.18■□□□□ 0.18
SMAD9O15198 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.18■□□□□ 0.18
SMAD9O15198 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.18■□□□□ 0.18
SMAD9O15198 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD9O15198 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD9O15198 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD9O15198 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD9O15198 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD9O15198 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD9O15198 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
SMAD9O15198 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD9O15198 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SMAD9O15198 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SMAD9O15198 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMAD9O15198 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SMAD9O15198 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SMAD9O15198 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.18■□□□□ 0.18
SMAD9O15198 AC139713.2-201ENST00000641328 2723 ntBASIC16.18■□□□□ 0.18
SMAD9O15198 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
SMAD9O15198 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD9O15198 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD9O15198 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD9O15198 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SMAD9O15198 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.17■□□□□ 0.18
SMAD9O15198 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD9O15198 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.17■□□□□ 0.18
SMAD9O15198 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.17■□□□□ 0.18
SMAD9O15198 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SMAD9O15198 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.17■□□□□ 0.18
SMAD9O15198 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD9O15198 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD9O15198 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.17■□□□□ 0.18
SMAD9O15198 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD9O15198 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD9O15198 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD9O15198 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD9O15198 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD9O15198 BX276092.5-203ENST00000456199 560 ntBASIC16.17■□□□□ 0.18
SMAD9O15198 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.17■□□□□ 0.18
SMAD9O15198 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD9O15198 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.17■□□□□ 0.18
SMAD9O15198 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.17■□□□□ 0.18
SMAD9O15198 AL121672.3-201ENST00000608644 468 ntBASIC16.17■□□□□ 0.18
SMAD9O15198 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.17■□□□□ 0.18
SMAD9O15198 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SMAD9O15198 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD9O15198 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
SMAD9O15198 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD9O15198 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.17■□□□□ 0.18
SMAD9O15198 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SMAD9O15198 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD9O15198 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.17■□□□□ 0.18
SMAD9O15198 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD9O15198 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.17■□□□□ 0.18
SMAD9O15198 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD9O15198 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
SMAD9O15198 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SMAD9O15198 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD9O15198 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMAD9O15198 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMAD9O15198 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.16■□□□□ 0.18
SMAD9O15198 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.16■□□□□ 0.18
SMAD9O15198 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SMAD9O15198 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMAD9O15198 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMAD9O15198 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMAD9O15198 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMAD9O15198 AC016734.2-201ENST00000624325 1377 ntBASIC16.16■□□□□ 0.18
SMAD9O15198 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SMAD9O15198 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMAD9O15198 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMAD9O15198 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMAD9O15198 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.16■□□□□ 0.18
SMAD9O15198 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SMAD9O15198 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.16■□□□□ 0.18
SMAD9O15198 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMAD9O15198 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.16■□□□□ 0.18
SMAD9O15198 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.16■□□□□ 0.18
SMAD9O15198 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.16■□□□□ 0.18
SMAD9O15198 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SMAD9O15198 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.16■□□□□ 0.18
SMAD9O15198 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMAD9O15198 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.16■□□□□ 0.18
SMAD9O15198 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.16■□□□□ 0.18
SMAD9O15198 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms