Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
O00370 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
O00370 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
O00370 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
O00370 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
O00370 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.97■□□□□ 0.63
O00370 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
O00370 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
O00370 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
O00370 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.97■□□□□ 0.63
O00370 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
O00370 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.97■□□□□ 0.63
O00370 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
O00370 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
O00370 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
O00370 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
O00370 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
O00370 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
O00370 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
O00370 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
O00370 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
O00370 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
O00370 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
O00370 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.97■□□□□ 0.63
O00370 AC091607.1-201ENST00000490318 1060 ntBASIC18.97■□□□□ 0.63
O00370 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
O00370 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.97■□□□□ 0.63
O00370 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.97■□□□□ 0.63
O00370 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.97■□□□□ 0.63
O00370 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
O00370 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
O00370 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
O00370 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
O00370 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
O00370 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.97■□□□□ 0.63
O00370 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
O00370 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
O00370 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
O00370 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.97■□□□□ 0.63
O00370 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.97■□□□□ 0.63
O00370 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
O00370 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.97■□□□□ 0.63
O00370 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
O00370 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
O00370 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
O00370 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
O00370 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.96■□□□□ 0.63
O00370 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
O00370 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
O00370 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
O00370 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
O00370 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
O00370 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
O00370 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
O00370 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.96■□□□□ 0.63
O00370 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
O00370 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
O00370 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
O00370 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
O00370 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
O00370 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.96■□□□□ 0.63
O00370 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
O00370 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
O00370 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
O00370 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
O00370 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
O00370 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
O00370 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.96■□□□□ 0.63
O00370 AP005901.3-202ENST00000581653 237 ntBASIC18.96■□□□□ 0.63
O00370 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
O00370 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.96■□□□□ 0.63
O00370 AC093458.2-201ENST00000623150 629 ntBASIC18.96■□□□□ 0.63
O00370 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
O00370 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
O00370 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.96■□□□□ 0.63
O00370 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
O00370 GNAS-203ENST00000306120 1878 ntBASIC18.96■□□□□ 0.63
O00370 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
O00370 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
O00370 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.96■□□□□ 0.63
O00370 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
O00370 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
O00370 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.96■□□□□ 0.63
O00370 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
O00370 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
O00370 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
O00370 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
O00370 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.95■□□□□ 0.62
O00370 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.95■□□□□ 0.62
O00370 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
O00370 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
O00370 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
O00370 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
O00370 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
O00370 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
O00370 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
O00370 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.95■□□□□ 0.62
O00370 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
O00370 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
O00370 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms