Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIC1O00299 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.81■□□□□ 0.28
CLIC1O00299 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLIC1O00299 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
CLIC1O00299 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIC1O00299 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIC1O00299 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIC1O00299 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.81■□□□□ 0.28
CLIC1O00299 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.81■□□□□ 0.28
CLIC1O00299 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.81■□□□□ 0.28
CLIC1O00299 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.81■□□□□ 0.28
CLIC1O00299 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIC1O00299 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.81■□□□□ 0.28
CLIC1O00299 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
CLIC1O00299 TMEM191A-211ENST00000637163 1067 ntBASIC16.81■□□□□ 0.28
CLIC1O00299 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
CLIC1O00299 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CLIC1O00299 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLIC1O00299 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIC1O00299 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIC1O00299 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLIC1O00299 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIC1O00299 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIC1O00299 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIC1O00299 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLIC1O00299 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLIC1O00299 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.8■□□□□ 0.28
CLIC1O00299 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLIC1O00299 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.8■□□□□ 0.28
CLIC1O00299 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLIC1O00299 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLIC1O00299 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLIC1O00299 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CLIC1O00299 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
CLIC1O00299 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.8■□□□□ 0.28
CLIC1O00299 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLIC1O00299 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.8■□□□□ 0.28
CLIC1O00299 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLIC1O00299 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.8■□□□□ 0.28
CLIC1O00299 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.8■□□□□ 0.28
CLIC1O00299 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.8■□□□□ 0.28
CLIC1O00299 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CLIC1O00299 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLIC1O00299 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLIC1O00299 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.8■□□□□ 0.28
CLIC1O00299 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CLIC1O00299 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CLIC1O00299 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLIC1O00299 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLIC1O00299 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLIC1O00299 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLIC1O00299 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.8■□□□□ 0.28
CLIC1O00299 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLIC1O00299 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CLIC1O00299 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLIC1O00299 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLIC1O00299 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CLIC1O00299 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CLIC1O00299 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLIC1O00299 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLIC1O00299 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CLIC1O00299 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CLIC1O00299 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLIC1O00299 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CLIC1O00299 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLIC1O00299 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLIC1O00299 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.79■□□□□ 0.28
CLIC1O00299 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CLIC1O00299 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CLIC1O00299 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLIC1O00299 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLIC1O00299 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLIC1O00299 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.79■□□□□ 0.28
CLIC1O00299 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.79■□□□□ 0.28
CLIC1O00299 ECEL1P3-201ENST00000427961 737 ntBASIC16.79■□□□□ 0.28
CLIC1O00299 DDX43P3-201ENST00000441064 443 ntBASIC16.79■□□□□ 0.28
CLIC1O00299 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.79■□□□□ 0.28
CLIC1O00299 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLIC1O00299 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CLIC1O00299 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLIC1O00299 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CLIC1O00299 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CLIC1O00299 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLIC1O00299 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLIC1O00299 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLIC1O00299 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLIC1O00299 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLIC1O00299 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.78■□□□□ 0.28
CLIC1O00299 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.78■□□□□ 0.28
CLIC1O00299 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.78■□□□□ 0.28
CLIC1O00299 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLIC1O00299 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.78■□□□□ 0.28
CLIC1O00299 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLIC1O00299 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.78■□□□□ 0.28
CLIC1O00299 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.78■□□□□ 0.28
CLIC1O00299 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLIC1O00299 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.78■□□□□ 0.28
CLIC1O00299 KRT18P65-201ENST00000439811 1286 ntBASIC16.78■□□□□ 0.28
CLIC1O00299 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.78■□□□□ 0.28
CLIC1O00299 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms