Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 AL662844.1-201ENST00000546340 181 ntBASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 SLC25A6P4-201ENST00000586535 553 ntBASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 AC005336.2-201ENST00000593183 939 ntBASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 AC114341.1-201ENST00000618070 349 ntBASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 AL096828.2-201ENST00000567259 1965 ntBASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 RCN1P2-201ENST00000398357 915 ntBASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 AP000347.1-202ENST00000435868 847 ntBASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 AC132008.2-207ENST00000454517 770 ntBASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 TP73-AS1-210ENST00000637775 1455 ntBASIC16.21■□□□□ 0.19
NPIPA2E9PIF3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NPIPA2E9PIF3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
NPIPA2E9PIF3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
NPIPA2E9PIF3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
NPIPA2E9PIF3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.21■□□□□ 0.18
NPIPA2E9PIF3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.21■□□□□ 0.18
NPIPA2E9PIF3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.21■□□□□ 0.18
NPIPA2E9PIF3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
NPIPA2E9PIF3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 REXO1L9P-201ENST00000604264 2108 ntBASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 AL390961.4-201ENST00000623958 2535 ntBASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPIPA2E9PIF3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms