Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.29■□□□□ 0.04
MEIS3P1A6NDR6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.29■□□□□ 0.04
MEIS3P1A6NDR6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.29■□□□□ 0.04
MEIS3P1A6NDR6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MEIS3P1A6NDR6 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MEIS3P1A6NDR6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.29■□□□□ 0.04
MEIS3P1A6NDR6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MEIS3P1A6NDR6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MEIS3P1A6NDR6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MEIS3P1A6NDR6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.29■□□□□ 0.04
MEIS3P1A6NDR6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
MEIS3P1A6NDR6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MEIS3P1A6NDR6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MEIS3P1A6NDR6 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
MEIS3P1A6NDR6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.29■□□□□ 0.04
MEIS3P1A6NDR6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MEIS3P1A6NDR6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MEIS3P1A6NDR6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MEIS3P1A6NDR6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 B3GAT3P1-201ENST00000471720 806 ntBASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 MIR3180-5-201ENST00000583743 153 ntBASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 AL353708.3-201ENST00000610272 989 ntBASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 MIR6786-201ENST00000616843 113 ntBASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MEIS3P1A6NDR6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 AC105020.1-201ENST00000435356 2205 ntBASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 AC142086.2-201ENST00000569753 217 ntBASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 AC026271.3-201ENST00000571884 352 ntBASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 AC104771.1-201ENST00000603335 964 ntBASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MEIS3P1A6NDR6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MEIS3P1A6NDR6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MEIS3P1A6NDR6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MEIS3P1A6NDR6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.27■□□□□ 0.03
MEIS3P1A6NDR6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
MEIS3P1A6NDR6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.27■□□□□ 0.03
MEIS3P1A6NDR6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
MEIS3P1A6NDR6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
MEIS3P1A6NDR6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MEIS3P1A6NDR6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
MEIS3P1A6NDR6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MEIS3P1A6NDR6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MEIS3P1A6NDR6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms