Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 KRT18P28-201ENST00000453838 1332 ntBASIC21.35■■□□□ 1.01
USP17L4A6NCW7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
USP17L4A6NCW7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
USP17L4A6NCW7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
USP17L4A6NCW7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
USP17L4A6NCW7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC21.35■■□□□ 1.01
USP17L4A6NCW7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
USP17L4A6NCW7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC21.35■■□□□ 1.01
USP17L4A6NCW7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
USP17L4A6NCW7 MIR4751-201ENST00000578027 74 ntBASIC21.35■■□□□ 1.01
USP17L4A6NCW7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
USP17L4A6NCW7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC21.35■■□□□ 1.01
USP17L4A6NCW7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
USP17L4A6NCW7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
USP17L4A6NCW7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.35■■□□□ 1.01
USP17L4A6NCW7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.35■■□□□ 1.01
USP17L4A6NCW7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
USP17L4A6NCW7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.34■■□□□ 1.01
USP17L4A6NCW7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
USP17L4A6NCW7 AC073592.3-201ENST00000625118 1834 ntBASIC21.34■■□□□ 1.01
USP17L4A6NCW7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
USP17L4A6NCW7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.34■■□□□ 1.01
USP17L4A6NCW7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC21.34■■□□□ 1.01
USP17L4A6NCW7 PRSS29P-201ENST00000440800 595 ntBASIC21.34■■□□□ 1.01
USP17L4A6NCW7 HCG4B-203ENST00000450128 991 ntBASIC21.34■■□□□ 1.01
USP17L4A6NCW7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC21.34■■□□□ 1.01
USP17L4A6NCW7 ALG1L5P-201ENST00000482043 771 ntBASIC21.34■■□□□ 1.01
USP17L4A6NCW7 RPS15P9-201ENST00000494093 319 ntBASIC21.34■■□□□ 1.01
USP17L4A6NCW7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC21.34■■□□□ 1.01
USP17L4A6NCW7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
USP17L4A6NCW7 IGHV3-65-201ENST00000523210 341 ntBASIC21.34■■□□□ 1.01
USP17L4A6NCW7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC21.34■■□□□ 1.01
USP17L4A6NCW7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC21.34■■□□□ 1.01
USP17L4A6NCW7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC21.34■■□□□ 1.01
USP17L4A6NCW7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21.34■■□□□ 1.01
USP17L4A6NCW7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
USP17L4A6NCW7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.34■■□□□ 1.01
USP17L4A6NCW7 MIR4469-201ENST00000583919 79 ntBASIC21.34■■□□□ 1.01
USP17L4A6NCW7 AC008667.4-201ENST00000607370 168 ntBASIC21.34■■□□□ 1.01
USP17L4A6NCW7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.34■■□□□ 1.01
USP17L4A6NCW7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.34■■□□□ 1.01
USP17L4A6NCW7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC21.34■■□□□ 1.01
USP17L4A6NCW7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC21.34■■□□□ 1.01
USP17L4A6NCW7 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.34■■□□□ 1.01
USP17L4A6NCW7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.34■■□□□ 1.01
USP17L4A6NCW7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
USP17L4A6NCW7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.33■■□□□ 1.01
USP17L4A6NCW7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
USP17L4A6NCW7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
USP17L4A6NCW7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
USP17L4A6NCW7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP17L4A6NCW7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP17L4A6NCW7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP17L4A6NCW7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP17L4A6NCW7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
USP17L4A6NCW7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP17L4A6NCW7 KLF4P1-201ENST00000412782 1185 ntBASIC21.33■■□□□ 1.01
USP17L4A6NCW7 SIGLEC30P-201ENST00000455569 941 ntBASIC21.33■■□□□ 1.01
USP17L4A6NCW7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC21.33■■□□□ 1.01
USP17L4A6NCW7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC21.33■■□□□ 1.01
USP17L4A6NCW7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
USP17L4A6NCW7 AC018845.2-201ENST00000568326 409 ntBASIC21.33■■□□□ 1.01
USP17L4A6NCW7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC21.33■■□□□ 1.01
USP17L4A6NCW7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
USP17L4A6NCW7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
USP17L4A6NCW7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1
USP17L4A6NCW7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC21.33■■□□□ 1
USP17L4A6NCW7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
USP17L4A6NCW7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
USP17L4A6NCW7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
USP17L4A6NCW7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
USP17L4A6NCW7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP17L4A6NCW7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP17L4A6NCW7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC21.32■■□□□ 1
USP17L4A6NCW7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
USP17L4A6NCW7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
USP17L4A6NCW7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP17L4A6NCW7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP17L4A6NCW7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP17L4A6NCW7 AC003669.1-201ENST00000334569 611 ntBASIC21.32■■□□□ 1
USP17L4A6NCW7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC21.32■■□□□ 1
USP17L4A6NCW7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.32■■□□□ 1
USP17L4A6NCW7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
USP17L4A6NCW7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC21.32■■□□□ 1
USP17L4A6NCW7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC21.32■■□□□ 1
USP17L4A6NCW7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC21.32■■□□□ 1
USP17L4A6NCW7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.32■■□□□ 1
USP17L4A6NCW7 AC004790.2-201ENST00000623588 572 ntBASIC21.32■■□□□ 1
USP17L4A6NCW7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC21.32■■□□□ 1
USP17L4A6NCW7 C20orf181-201ENST00000623918 480 ntBASIC21.32■■□□□ 1
USP17L4A6NCW7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
USP17L4A6NCW7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.32■■□□□ 1
USP17L4A6NCW7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.32■■□□□ 1
USP17L4A6NCW7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.32■■□□□ 1
USP17L4A6NCW7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.32■■□□□ 1
USP17L4A6NCW7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
USP17L4A6NCW7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
USP17L4A6NCW7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
USP17L4A6NCW7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
USP17L4A6NCW7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms