Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SHISA3A0PJX4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.52■□□□□ 0.08
SHISA3A0PJX4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC15.52■□□□□ 0.08
SHISA3A0PJX4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.52■□□□□ 0.08
SHISA3A0PJX4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
SHISA3A0PJX4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.52■□□□□ 0.08
SHISA3A0PJX4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.52■□□□□ 0.08
SHISA3A0PJX4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.52■□□□□ 0.08
SHISA3A0PJX4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
SHISA3A0PJX4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SHISA3A0PJX4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.52■□□□□ 0.07
SHISA3A0PJX4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SHISA3A0PJX4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHISA3A0PJX4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHISA3A0PJX4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SHISA3A0PJX4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHISA3A0PJX4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHISA3A0PJX4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHISA3A0PJX4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.52■□□□□ 0.07
SHISA3A0PJX4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.51■□□□□ 0.07
SHISA3A0PJX4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 AC026691.1-201ENST00000602502 2017 ntBASIC15.51■□□□□ 0.07
SHISA3A0PJX4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SHISA3A0PJX4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 AL596257.1-201ENST00000641463 2694 ntBASIC15.5■□□□□ 0.07
SHISA3A0PJX4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 WWOX-216ENST00000569818 525 ntBASIC15.5■□□□□ 0.07
SHISA3A0PJX4 MIR3180-4-201ENST00000582223 153 ntBASIC15.5■□□□□ 0.07
SHISA3A0PJX4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHISA3A0PJX4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms