Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 AC046185.3-201ENST00000623228 1824 ntBASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 WWOX-216ENST00000569818 525 ntBASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 AF186192.3-201ENST00000583427 947 ntBASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 AL109923.1-201ENST00000618799 583 ntBASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 PCDHB17P-201ENST00000539533 2393 ntBASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV3S1A0A5B6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 AC006449.5-201ENST00000610658 2098 ntBASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 RN7SL471P-201ENST00000580476 299 ntBASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV3S1A0A5B6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
TCRBV3S1A0A5B6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.64■□□□□ 0.25
TCRBV3S1A0A5B6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms