Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 PRELID1P1-202ENST00000567272 903 ntBASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 AC018470.1-201ENST00000624790 3129 ntBASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 AL353801.3-201ENST00000609898 542 ntBASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TNFSF12-TNFSF13A0A0A6YY99 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.21■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 LINC00265-3P-201ENST00000447588 903 ntBASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 TOB2P1-201ENST00000469761 992 ntBASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 AC011840.4-201ENST00000578471 627 ntBASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 AC006116.8-202ENST00000587620 1550 ntBASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TNFSF12-TNFSF13A0A0A6YY99 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms