Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.66■□□□□ 0.26
TRBV5-3A0A0A0MS03 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 AP006294.2-201ENST00000641667 209 ntBASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.65■□□□□ 0.26
TRBV5-3A0A0A0MS03 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.64■□□□□ 0.26
TRBV5-3A0A0A0MS03 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRBV5-3A0A0A0MS03 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV5-3A0A0A0MS03 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV5-3A0A0A0MS03 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRBV5-3A0A0A0MS03 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.64■□□□□ 0.25
TRBV5-3A0A0A0MS03 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV5-3A0A0A0MS03 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV5-3A0A0A0MS03 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV5-3A0A0A0MS03 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRBV5-3A0A0A0MS03 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV5-3A0A0A0MS03 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV5-3A0A0A0MS03 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.64■□□□□ 0.25
TRBV5-3A0A0A0MS03 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.64■□□□□ 0.25
TRBV5-3A0A0A0MS03 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRBV5-3A0A0A0MS03 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV5-3A0A0A0MS03 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV5-3A0A0A0MS03 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV5-3A0A0A0MS03 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRBV5-3A0A0A0MS03 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TRBV5-3A0A0A0MS03 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV5-3A0A0A0MS03 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRBV5-3A0A0A0MS03 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
TRBV5-3A0A0A0MS03 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.64■□□□□ 0.25
TRBV5-3A0A0A0MS03 LINC01568-207ENST00000641790 1380 ntBASIC16.64■□□□□ 0.25
TRBV5-3A0A0A0MS03 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 TSPY12P-201ENST00000421279 868 ntBASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 AL139327.4-201ENST00000612362 153 ntBASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 AL023973.1-201ENST00000624619 620 ntBASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms