Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LRCH1Q9Y2L9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.22■■□□□ 1.31
LRCH1Q9Y2L9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LRCH1Q9Y2L9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
LRCH1Q9Y2L9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LRCH1Q9Y2L9 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
LRCH1Q9Y2L9 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
LRCH1Q9Y2L9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LRCH1Q9Y2L9 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LRCH1Q9Y2L9 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
LRCH1Q9Y2L9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.2■■□□□ 1.3
LRCH1Q9Y2L9 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LRCH1Q9Y2L9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
LRCH1Q9Y2L9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
LRCH1Q9Y2L9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRCH1Q9Y2L9 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.19■■□□□ 1.3
LRCH1Q9Y2L9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRCH1Q9Y2L9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
LRCH1Q9Y2L9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LRCH1Q9Y2L9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LRCH1Q9Y2L9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRCH1Q9Y2L9 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRCH1Q9Y2L9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.17■■□□□ 1.3
LRCH1Q9Y2L9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.17■■□□□ 1.3
LRCH1Q9Y2L9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRCH1Q9Y2L9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.17■■□□□ 1.3
LRCH1Q9Y2L9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRCH1Q9Y2L9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LRCH1Q9Y2L9 AC018358.1-201ENST00000631079 1402 ntBASIC23.16■■□□□ 1.3
LRCH1Q9Y2L9 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
LRCH1Q9Y2L9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.16■■□□□ 1.3
LRCH1Q9Y2L9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
LRCH1Q9Y2L9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LRCH1Q9Y2L9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LRCH1Q9Y2L9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LRCH1Q9Y2L9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
LRCH1Q9Y2L9 AC097358.2-201ENST00000607541 1159 ntBASIC23.15■■□□□ 1.3
LRCH1Q9Y2L9 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LRCH1Q9Y2L9 AC138932.3-201ENST00000567634 1902 ntBASIC23.15■■□□□ 1.3
LRCH1Q9Y2L9 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LRCH1Q9Y2L9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LRCH1Q9Y2L9 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LRCH1Q9Y2L9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
LRCH1Q9Y2L9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
LRCH1Q9Y2L9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
LRCH1Q9Y2L9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
LRCH1Q9Y2L9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LRCH1Q9Y2L9 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.14■■□□□ 1.29
LRCH1Q9Y2L9 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LRCH1Q9Y2L9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
LRCH1Q9Y2L9 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LRCH1Q9Y2L9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LRCH1Q9Y2L9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
LRCH1Q9Y2L9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LRCH1Q9Y2L9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LRCH1Q9Y2L9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
LRCH1Q9Y2L9 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LRCH1Q9Y2L9 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.13■■□□□ 1.29
LRCH1Q9Y2L9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LRCH1Q9Y2L9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LRCH1Q9Y2L9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LRCH1Q9Y2L9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
LRCH1Q9Y2L9 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LRCH1Q9Y2L9 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.12■■□□□ 1.29
LRCH1Q9Y2L9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LRCH1Q9Y2L9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LRCH1Q9Y2L9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LRCH1Q9Y2L9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
LRCH1Q9Y2L9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LRCH1Q9Y2L9 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
LRCH1Q9Y2L9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LRCH1Q9Y2L9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
LRCH1Q9Y2L9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LRCH1Q9Y2L9 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.09■■□□□ 1.29
LRCH1Q9Y2L9 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.09■■□□□ 1.29
LRCH1Q9Y2L9 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.09■■□□□ 1.29
LRCH1Q9Y2L9 AC022211.4-201ENST00000625094 2161 ntBASIC23.08■■□□□ 1.29
LRCH1Q9Y2L9 AC136428.2-201ENST00000563187 214 ntBASIC23.08■■□□□ 1.29
LRCH1Q9Y2L9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
LRCH1Q9Y2L9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
LRCH1Q9Y2L9 AC127502.1-201ENST00000399971 1502 ntBASIC23.08■■□□□ 1.28
LRCH1Q9Y2L9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LRCH1Q9Y2L9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LRCH1Q9Y2L9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.07■■□□□ 1.28
LRCH1Q9Y2L9 AP004609.3-201ENST00000610705 1884 ntBASIC23.07■■□□□ 1.28
LRCH1Q9Y2L9 WASH5P-204ENST00000632292 975 ntBASIC23.07■■□□□ 1.28
LRCH1Q9Y2L9 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.07■■□□□ 1.28
LRCH1Q9Y2L9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
LRCH1Q9Y2L9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
LRCH1Q9Y2L9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.06■■□□□ 1.28
LRCH1Q9Y2L9 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LRCH1Q9Y2L9 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.06■■□□□ 1.28
LRCH1Q9Y2L9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
LRCH1Q9Y2L9 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LRCH1Q9Y2L9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
LRCH1Q9Y2L9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23.05■■□□□ 1.28
LRCH1Q9Y2L9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LRCH1Q9Y2L9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
LRCH1Q9Y2L9 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LRCH1Q9Y2L9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms