Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 AL133380.1-201ENST00000506013 324 ntBASIC20.51■□□□□ 0.87
UBQLN2Q9UHD9 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBQLN2Q9UHD9 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBQLN2Q9UHD9 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.5■□□□□ 0.87
UBQLN2Q9UHD9 AP004833.2-201ENST00000532228 1454 ntBASIC20.5■□□□□ 0.87
UBQLN2Q9UHD9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UBQLN2Q9UHD9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
UBQLN2Q9UHD9 AC136428.2-201ENST00000563187 214 ntBASIC20.5■□□□□ 0.87
UBQLN2Q9UHD9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.5■□□□□ 0.87
UBQLN2Q9UHD9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.5■□□□□ 0.87
UBQLN2Q9UHD9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UBQLN2Q9UHD9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.5■□□□□ 0.87
UBQLN2Q9UHD9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBQLN2Q9UHD9 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBQLN2Q9UHD9 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBQLN2Q9UHD9 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBQLN2Q9UHD9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBQLN2Q9UHD9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBQLN2Q9UHD9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBQLN2Q9UHD9 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBQLN2Q9UHD9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBQLN2Q9UHD9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBQLN2Q9UHD9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.49■□□□□ 0.87
UBQLN2Q9UHD9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBQLN2Q9UHD9 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBQLN2Q9UHD9 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.48■□□□□ 0.87
UBQLN2Q9UHD9 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBQLN2Q9UHD9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UBQLN2Q9UHD9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBQLN2Q9UHD9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.48■□□□□ 0.87
UBQLN2Q9UHD9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBQLN2Q9UHD9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBQLN2Q9UHD9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBQLN2Q9UHD9 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.47■□□□□ 0.87
UBQLN2Q9UHD9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN2Q9UHD9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN2Q9UHD9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN2Q9UHD9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.47■□□□□ 0.87
UBQLN2Q9UHD9 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.47■□□□□ 0.87
UBQLN2Q9UHD9 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.47■□□□□ 0.87
UBQLN2Q9UHD9 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN2Q9UHD9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN2Q9UHD9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.46■□□□□ 0.87
UBQLN2Q9UHD9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN2Q9UHD9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN2Q9UHD9 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.46■□□□□ 0.87
UBQLN2Q9UHD9 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN2Q9UHD9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.46■□□□□ 0.87
UBQLN2Q9UHD9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
UBQLN2Q9UHD9 AC142381.3-201ENST00000568208 1670 ntBASIC20.45■□□□□ 0.86
UBQLN2Q9UHD9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN2Q9UHD9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN2Q9UHD9 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN2Q9UHD9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN2Q9UHD9 AL139125.2-201ENST00000623134 1869 ntBASIC20.44■□□□□ 0.86
UBQLN2Q9UHD9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN2Q9UHD9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN2Q9UHD9 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN2Q9UHD9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN2Q9UHD9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
UBQLN2Q9UHD9 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN2Q9UHD9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBQLN2Q9UHD9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBQLN2Q9UHD9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBQLN2Q9UHD9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBQLN2Q9UHD9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
UBQLN2Q9UHD9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
UBQLN2Q9UHD9 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.43■□□□□ 0.86
UBQLN2Q9UHD9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBQLN2Q9UHD9 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBQLN2Q9UHD9 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
UBQLN2Q9UHD9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBQLN2Q9UHD9 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
UBQLN2Q9UHD9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.42■□□□□ 0.86
UBQLN2Q9UHD9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
UBQLN2Q9UHD9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UBQLN2Q9UHD9 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
UBQLN2Q9UHD9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBQLN2Q9UHD9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBQLN2Q9UHD9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBQLN2Q9UHD9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBQLN2Q9UHD9 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBQLN2Q9UHD9 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBQLN2Q9UHD9 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBQLN2Q9UHD9 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
UBQLN2Q9UHD9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
UBQLN2Q9UHD9 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBQLN2Q9UHD9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBQLN2Q9UHD9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
UBQLN2Q9UHD9 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBQLN2Q9UHD9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
UBQLN2Q9UHD9 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
UBQLN2Q9UHD9 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBQLN2Q9UHD9 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBQLN2Q9UHD9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBQLN2Q9UHD9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBQLN2Q9UHD9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UBQLN2Q9UHD9 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.37■□□□□ 0.85
UBQLN2Q9UHD9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBQLN2Q9UHD9 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms