Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
NELFAQ9H3P2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NELFAQ9H3P2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NELFAQ9H3P2 AC060814.1-201ENST00000554326 538 ntBASIC21.8■■□□□ 1.08
NELFAQ9H3P2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
NELFAQ9H3P2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NELFAQ9H3P2 AP004609.3-201ENST00000610705 1884 ntBASIC21.79■■□□□ 1.08
NELFAQ9H3P2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NELFAQ9H3P2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.79■■□□□ 1.08
NELFAQ9H3P2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NELFAQ9H3P2 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.79■■□□□ 1.08
NELFAQ9H3P2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.79■■□□□ 1.08
NELFAQ9H3P2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NELFAQ9H3P2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NELFAQ9H3P2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NELFAQ9H3P2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NELFAQ9H3P2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
NELFAQ9H3P2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.78■■□□□ 1.08
NELFAQ9H3P2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
NELFAQ9H3P2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NELFAQ9H3P2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NELFAQ9H3P2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NELFAQ9H3P2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
NELFAQ9H3P2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NELFAQ9H3P2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NELFAQ9H3P2 AL359258.2-201ENST00000564063 1566 ntBASIC21.77■■□□□ 1.08
NELFAQ9H3P2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NELFAQ9H3P2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NELFAQ9H3P2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NELFAQ9H3P2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NELFAQ9H3P2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
NELFAQ9H3P2 AC142472.1-201ENST00000612013 1741 ntBASIC21.76■■□□□ 1.07
NELFAQ9H3P2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NELFAQ9H3P2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NELFAQ9H3P2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NELFAQ9H3P2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NELFAQ9H3P2 GPX1-201ENST00000419349 1106 ntBASIC21.75■■□□□ 1.07
NELFAQ9H3P2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.75■■□□□ 1.07
NELFAQ9H3P2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.75■■□□□ 1.07
NELFAQ9H3P2 AC022413.1-201ENST00000624602 984 ntBASIC21.75■■□□□ 1.07
NELFAQ9H3P2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NELFAQ9H3P2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.75■■□□□ 1.07
NELFAQ9H3P2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.74■■□□□ 1.07
NELFAQ9H3P2 AC126177.7-201ENST00000547904 679 ntBASIC21.74■■□□□ 1.07
NELFAQ9H3P2 HSD17B1P1-201ENST00000590052 955 ntBASIC21.74■■□□□ 1.07
NELFAQ9H3P2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.74■■□□□ 1.07
NELFAQ9H3P2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NELFAQ9H3P2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
NELFAQ9H3P2 AL157400.5-201ENST00000507624 621 ntBASIC21.73■■□□□ 1.07
NELFAQ9H3P2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.73■■□□□ 1.07
NELFAQ9H3P2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.73■■□□□ 1.07
NELFAQ9H3P2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NELFAQ9H3P2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NELFAQ9H3P2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.72■■□□□ 1.07
NELFAQ9H3P2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NELFAQ9H3P2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.71■■□□□ 1.07
NELFAQ9H3P2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NELFAQ9H3P2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NELFAQ9H3P2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
NELFAQ9H3P2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.71■■□□□ 1.07
NELFAQ9H3P2 AC092296.2-201ENST00000589470 999 ntBASIC21.71■■□□□ 1.07
NELFAQ9H3P2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NELFAQ9H3P2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NELFAQ9H3P2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NELFAQ9H3P2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NELFAQ9H3P2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NELFAQ9H3P2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.7■■□□□ 1.06
NELFAQ9H3P2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.7■■□□□ 1.06
NELFAQ9H3P2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NELFAQ9H3P2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.69■■□□□ 1.06
NELFAQ9H3P2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NELFAQ9H3P2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NELFAQ9H3P2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.69■■□□□ 1.06
NELFAQ9H3P2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NELFAQ9H3P2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NELFAQ9H3P2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.68■■□□□ 1.06
NELFAQ9H3P2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NELFAQ9H3P2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.68■■□□□ 1.06
NELFAQ9H3P2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NELFAQ9H3P2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NELFAQ9H3P2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.68■■□□□ 1.06
NELFAQ9H3P2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.67■■□□□ 1.06
NELFAQ9H3P2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NELFAQ9H3P2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NELFAQ9H3P2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NELFAQ9H3P2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NELFAQ9H3P2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.66■■□□□ 1.06
NELFAQ9H3P2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.66■■□□□ 1.06
NELFAQ9H3P2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NELFAQ9H3P2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NELFAQ9H3P2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NELFAQ9H3P2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.65■■□□□ 1.06
NELFAQ9H3P2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NELFAQ9H3P2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NELFAQ9H3P2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NELFAQ9H3P2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
NELFAQ9H3P2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.65■■□□□ 1.06
NELFAQ9H3P2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.65■■□□□ 1.06
NELFAQ9H3P2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.64■■□□□ 1.06
NELFAQ9H3P2 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms