Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
COMMD4Q9H0A8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COMMD4Q9H0A8 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COMMD4Q9H0A8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COMMD4Q9H0A8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COMMD4Q9H0A8 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.51■■□□□ 1.03
COMMD4Q9H0A8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COMMD4Q9H0A8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COMMD4Q9H0A8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COMMD4Q9H0A8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COMMD4Q9H0A8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COMMD4Q9H0A8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COMMD4Q9H0A8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
COMMD4Q9H0A8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COMMD4Q9H0A8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
COMMD4Q9H0A8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
COMMD4Q9H0A8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
COMMD4Q9H0A8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.49■■□□□ 1.03
COMMD4Q9H0A8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.49■■□□□ 1.03
COMMD4Q9H0A8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COMMD4Q9H0A8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.49■■□□□ 1.03
COMMD4Q9H0A8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.48■■□□□ 1.03
COMMD4Q9H0A8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
COMMD4Q9H0A8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.48■■□□□ 1.03
COMMD4Q9H0A8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COMMD4Q9H0A8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COMMD4Q9H0A8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COMMD4Q9H0A8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
COMMD4Q9H0A8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COMMD4Q9H0A8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.47■■□□□ 1.03
COMMD4Q9H0A8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COMMD4Q9H0A8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COMMD4Q9H0A8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COMMD4Q9H0A8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COMMD4Q9H0A8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COMMD4Q9H0A8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COMMD4Q9H0A8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COMMD4Q9H0A8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COMMD4Q9H0A8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.46■■□□□ 1.03
COMMD4Q9H0A8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
COMMD4Q9H0A8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.03
COMMD4Q9H0A8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
COMMD4Q9H0A8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COMMD4Q9H0A8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COMMD4Q9H0A8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.45■■□□□ 1.02
COMMD4Q9H0A8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COMMD4Q9H0A8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
COMMD4Q9H0A8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
COMMD4Q9H0A8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COMMD4Q9H0A8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COMMD4Q9H0A8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COMMD4Q9H0A8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
COMMD4Q9H0A8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
COMMD4Q9H0A8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.43■■□□□ 1.02
COMMD4Q9H0A8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COMMD4Q9H0A8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.43■■□□□ 1.02
COMMD4Q9H0A8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.43■■□□□ 1.02
COMMD4Q9H0A8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COMMD4Q9H0A8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COMMD4Q9H0A8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.43■■□□□ 1.02
COMMD4Q9H0A8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COMMD4Q9H0A8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
COMMD4Q9H0A8 AC010501.1-201ENST00000606270 1962 ntBASIC21.42■■□□□ 1.02
COMMD4Q9H0A8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.42■■□□□ 1.02
COMMD4Q9H0A8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COMMD4Q9H0A8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
COMMD4Q9H0A8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.41■■□□□ 1.02
COMMD4Q9H0A8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
COMMD4Q9H0A8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COMMD4Q9H0A8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COMMD4Q9H0A8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
COMMD4Q9H0A8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COMMD4Q9H0A8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
COMMD4Q9H0A8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
COMMD4Q9H0A8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.4■■□□□ 1.02
COMMD4Q9H0A8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
COMMD4Q9H0A8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COMMD4Q9H0A8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.4■■□□□ 1.02
COMMD4Q9H0A8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.39■■□□□ 1.02
COMMD4Q9H0A8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
COMMD4Q9H0A8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COMMD4Q9H0A8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.39■■□□□ 1.01
COMMD4Q9H0A8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COMMD4Q9H0A8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.39■■□□□ 1.01
COMMD4Q9H0A8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COMMD4Q9H0A8 DUX4L29-201ENST00000425409 679 ntBASIC21.38■■□□□ 1.01
COMMD4Q9H0A8 AC021231.2-201ENST00000594613 730 ntBASIC21.38■■□□□ 1.01
COMMD4Q9H0A8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COMMD4Q9H0A8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COMMD4Q9H0A8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COMMD4Q9H0A8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
COMMD4Q9H0A8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COMMD4Q9H0A8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
COMMD4Q9H0A8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COMMD4Q9H0A8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.37■■□□□ 1.01
COMMD4Q9H0A8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
COMMD4Q9H0A8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COMMD4Q9H0A8 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
COMMD4Q9H0A8 ERN1-208ENST00000606895 2068 ntBASIC21.36■■□□□ 1.01
COMMD4Q9H0A8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms