Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 AC145676.1-201ENST00000514988 2004 ntBASIC20.13■□□□□ 0.81
R3HDM4Q96D70 AP004609.3-201ENST00000610705 1884 ntBASIC20.13■□□□□ 0.81
R3HDM4Q96D70 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
R3HDM4Q96D70 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3HDM4Q96D70 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3HDM4Q96D70 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3HDM4Q96D70 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.12■□□□□ 0.81
R3HDM4Q96D70 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
R3HDM4Q96D70 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
R3HDM4Q96D70 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.11■□□□□ 0.81
R3HDM4Q96D70 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
R3HDM4Q96D70 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
R3HDM4Q96D70 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
R3HDM4Q96D70 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.11■□□□□ 0.81
R3HDM4Q96D70 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.11■□□□□ 0.81
R3HDM4Q96D70 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
R3HDM4Q96D70 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3HDM4Q96D70 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
R3HDM4Q96D70 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
R3HDM4Q96D70 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
R3HDM4Q96D70 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
R3HDM4Q96D70 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
R3HDM4Q96D70 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3HDM4Q96D70 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3HDM4Q96D70 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
R3HDM4Q96D70 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.1■□□□□ 0.81
R3HDM4Q96D70 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
R3HDM4Q96D70 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
R3HDM4Q96D70 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.09■□□□□ 0.81
R3HDM4Q96D70 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.09■□□□□ 0.81
R3HDM4Q96D70 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.09■□□□□ 0.81
R3HDM4Q96D70 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
R3HDM4Q96D70 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.08■□□□□ 0.81
R3HDM4Q96D70 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
R3HDM4Q96D70 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
R3HDM4Q96D70 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
R3HDM4Q96D70 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
R3HDM4Q96D70 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.08■□□□□ 0.81
R3HDM4Q96D70 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.08■□□□□ 0.81
R3HDM4Q96D70 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.08■□□□□ 0.8
R3HDM4Q96D70 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
R3HDM4Q96D70 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.07■□□□□ 0.8
R3HDM4Q96D70 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
R3HDM4Q96D70 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
R3HDM4Q96D70 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
R3HDM4Q96D70 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
R3HDM4Q96D70 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
R3HDM4Q96D70 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
R3HDM4Q96D70 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
R3HDM4Q96D70 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
R3HDM4Q96D70 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
R3HDM4Q96D70 AC092803.2-201ENST00000564287 1899 ntBASIC20.05■□□□□ 0.8
R3HDM4Q96D70 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
R3HDM4Q96D70 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
R3HDM4Q96D70 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.04■□□□□ 0.8
R3HDM4Q96D70 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.04■□□□□ 0.8
R3HDM4Q96D70 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
R3HDM4Q96D70 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
R3HDM4Q96D70 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
R3HDM4Q96D70 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
R3HDM4Q96D70 WHAMMP3-201ENST00000611636 1609 ntBASIC20.02■□□□□ 0.8
R3HDM4Q96D70 AC142472.1-201ENST00000612013 1741 ntBASIC20.02■□□□□ 0.8
R3HDM4Q96D70 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
R3HDM4Q96D70 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
R3HDM4Q96D70 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
R3HDM4Q96D70 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.02■□□□□ 0.8
R3HDM4Q96D70 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
R3HDM4Q96D70 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.02■□□□□ 0.8
R3HDM4Q96D70 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
R3HDM4Q96D70 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.02■□□□□ 0.79
R3HDM4Q96D70 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
R3HDM4Q96D70 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
R3HDM4Q96D70 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
R3HDM4Q96D70 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.01■□□□□ 0.79
R3HDM4Q96D70 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.01■□□□□ 0.79
R3HDM4Q96D70 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.01■□□□□ 0.79
R3HDM4Q96D70 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.01■□□□□ 0.79
R3HDM4Q96D70 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
R3HDM4Q96D70 DUSP8P4-201ENST00000399538 1761 ntBASIC20■□□□□ 0.79
R3HDM4Q96D70 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
R3HDM4Q96D70 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
R3HDM4Q96D70 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
R3HDM4Q96D70 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20■□□□□ 0.79
R3HDM4Q96D70 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3HDM4Q96D70 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3HDM4Q96D70 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
R3HDM4Q96D70 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.99■□□□□ 0.79
R3HDM4Q96D70 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3HDM4Q96D70 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.99■□□□□ 0.79
R3HDM4Q96D70 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.99■□□□□ 0.79
R3HDM4Q96D70 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3HDM4Q96D70 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3HDM4Q96D70 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
R3HDM4Q96D70 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
R3HDM4Q96D70 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
R3HDM4Q96D70 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.98■□□□□ 0.79
R3HDM4Q96D70 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
R3HDM4Q96D70 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
R3HDM4Q96D70 GPX1-201ENST00000419349 1106 ntBASIC19.98■□□□□ 0.79
R3HDM4Q96D70 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms