Protein–RNA interactions for Protein: Q8N9V2

TRIML1, Probable E3 ubiquitin-protein ligase TRIML1, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML1Q8N9V2 DUX4L13-201ENST00000554103 1267 ntBASIC27.34■■□□□ 1.97
TRIML1Q8N9V2 DUX4L15-201ENST00000611059 1267 ntBASIC27.34■■□□□ 1.97
TRIML1Q8N9V2 DUX4L23-201ENST00000615195 1269 ntBASIC27.34■■□□□ 1.97
TRIML1Q8N9V2 DUX4L24-201ENST00000617576 1269 ntBASIC27.34■■□□□ 1.97
TRIML1Q8N9V2 DUX4L22-201ENST00000618238 1269 ntBASIC27.34■■□□□ 1.97
TRIML1Q8N9V2 DUX4L20-201ENST00000619712 1269 ntBASIC27.34■■□□□ 1.97
TRIML1Q8N9V2 DUX4L21-201ENST00000622058 1269 ntBASIC27.34■■□□□ 1.97
TRIML1Q8N9V2 DUX4L10-201ENST00000622460 1267 ntBASIC27.34■■□□□ 1.97
TRIML1Q8N9V2 DUX4L25-201ENST00000624915 1269 ntBASIC27.34■■□□□ 1.97
TRIML1Q8N9V2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC27.34■■□□□ 1.97
TRIML1Q8N9V2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC27.34■■□□□ 1.97
TRIML1Q8N9V2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
TRIML1Q8N9V2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
TRIML1Q8N9V2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC27.33■■□□□ 1.97
TRIML1Q8N9V2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC27.33■■□□□ 1.97
TRIML1Q8N9V2 AC008813.1-201ENST00000536597 885 ntBASIC27.33■■□□□ 1.97
TRIML1Q8N9V2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC27.33■■□□□ 1.97
TRIML1Q8N9V2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
TRIML1Q8N9V2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
TRIML1Q8N9V2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
TRIML1Q8N9V2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TRIML1Q8N9V2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TRIML1Q8N9V2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
TRIML1Q8N9V2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC27.32■■□□□ 1.96
TRIML1Q8N9V2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
TRIML1Q8N9V2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.32■■□□□ 1.96
TRIML1Q8N9V2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.32■■□□□ 1.96
TRIML1Q8N9V2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
TRIML1Q8N9V2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC27.31■■□□□ 1.96
TRIML1Q8N9V2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC27.31■■□□□ 1.96
TRIML1Q8N9V2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.31■■□□□ 1.96
TRIML1Q8N9V2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
TRIML1Q8N9V2 AC010501.1-201ENST00000606270 1962 ntBASIC27.29■■□□□ 1.96
TRIML1Q8N9V2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC27.29■■□□□ 1.96
TRIML1Q8N9V2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TRIML1Q8N9V2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC27.28■■□□□ 1.96
TRIML1Q8N9V2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TRIML1Q8N9V2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.28■■□□□ 1.96
TRIML1Q8N9V2 AC148477.6-201ENST00000623746 465 ntBASIC27.28■■□□□ 1.96
TRIML1Q8N9V2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC27.27■■□□□ 1.96
TRIML1Q8N9V2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
TRIML1Q8N9V2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TRIML1Q8N9V2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TRIML1Q8N9V2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TRIML1Q8N9V2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TRIML1Q8N9V2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC27.26■■□□□ 1.95
TRIML1Q8N9V2 HLA-V-202ENST00000446817 847 ntBASIC27.26■■□□□ 1.95
TRIML1Q8N9V2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TRIML1Q8N9V2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TRIML1Q8N9V2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
TRIML1Q8N9V2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
TRIML1Q8N9V2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TRIML1Q8N9V2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TRIML1Q8N9V2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TRIML1Q8N9V2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
TRIML1Q8N9V2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TRIML1Q8N9V2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC27.25■■□□□ 1.95
TRIML1Q8N9V2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.25■■□□□ 1.95
TRIML1Q8N9V2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC27.25■■□□□ 1.95
TRIML1Q8N9V2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TRIML1Q8N9V2 MIR219A2-201ENST00000608502 1504 ntBASIC27.25■■□□□ 1.95
TRIML1Q8N9V2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC27.24■■□□□ 1.95
TRIML1Q8N9V2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
TRIML1Q8N9V2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TRIML1Q8N9V2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TRIML1Q8N9V2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
TRIML1Q8N9V2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TRIML1Q8N9V2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TRIML1Q8N9V2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TRIML1Q8N9V2 ERN1-208ENST00000606895 2068 ntBASIC27.23■■□□□ 1.95
TRIML1Q8N9V2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
TRIML1Q8N9V2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
TRIML1Q8N9V2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
TRIML1Q8N9V2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
TRIML1Q8N9V2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
TRIML1Q8N9V2 ZNRF2P2-203ENST00000454624 420 ntBASIC27.22■■□□□ 1.95
TRIML1Q8N9V2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.22■■□□□ 1.95
TRIML1Q8N9V2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.22■■□□□ 1.95
TRIML1Q8N9V2 DUX4L11-201ENST00000611504 1267 ntBASIC27.22■■□□□ 1.95
TRIML1Q8N9V2 DUX4L12-201ENST00000614593 1267 ntBASIC27.22■■□□□ 1.95
TRIML1Q8N9V2 DUX4L14-201ENST00000621227 1267 ntBASIC27.22■■□□□ 1.95
TRIML1Q8N9V2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TRIML1Q8N9V2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
TRIML1Q8N9V2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
TRIML1Q8N9V2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
TRIML1Q8N9V2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
TRIML1Q8N9V2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
TRIML1Q8N9V2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
TRIML1Q8N9V2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.2■■□□□ 1.94
TRIML1Q8N9V2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC27.2■■□□□ 1.94
TRIML1Q8N9V2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
TRIML1Q8N9V2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC27.2■■□□□ 1.94
TRIML1Q8N9V2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC27.19■■□□□ 1.94
TRIML1Q8N9V2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TRIML1Q8N9V2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
TRIML1Q8N9V2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TRIML1Q8N9V2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TRIML1Q8N9V2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
TRIML1Q8N9V2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.18■■□□□ 1.94
TRIML1Q8N9V2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 273.6 ms