Protein–RNA interactions for Protein: Q8N8D7

NKAIN3, Sodium/potassium-transporting ATPase subunit beta-1-interacting protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKAIN3Q8N8D7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NKAIN3Q8N8D7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NKAIN3Q8N8D7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NKAIN3Q8N8D7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NKAIN3Q8N8D7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NKAIN3Q8N8D7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.11■□□□□ 0.97
NKAIN3Q8N8D7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NKAIN3Q8N8D7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
NKAIN3Q8N8D7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.1■□□□□ 0.97
NKAIN3Q8N8D7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NKAIN3Q8N8D7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NKAIN3Q8N8D7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.09■□□□□ 0.97
NKAIN3Q8N8D7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NKAIN3Q8N8D7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NKAIN3Q8N8D7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NKAIN3Q8N8D7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NKAIN3Q8N8D7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
NKAIN3Q8N8D7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NKAIN3Q8N8D7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.08■□□□□ 0.97
NKAIN3Q8N8D7 AC093323.1-202ENST00000635031 2045 ntBASIC21.08■□□□□ 0.97
NKAIN3Q8N8D7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.08■□□□□ 0.96
NKAIN3Q8N8D7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.08■□□□□ 0.96
NKAIN3Q8N8D7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.07■□□□□ 0.96
NKAIN3Q8N8D7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NKAIN3Q8N8D7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.07■□□□□ 0.96
NKAIN3Q8N8D7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.07■□□□□ 0.96
NKAIN3Q8N8D7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NKAIN3Q8N8D7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NKAIN3Q8N8D7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NKAIN3Q8N8D7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NKAIN3Q8N8D7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NKAIN3Q8N8D7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NKAIN3Q8N8D7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NKAIN3Q8N8D7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NKAIN3Q8N8D7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
NKAIN3Q8N8D7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.05■□□□□ 0.96
NKAIN3Q8N8D7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.05■□□□□ 0.96
NKAIN3Q8N8D7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NKAIN3Q8N8D7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NKAIN3Q8N8D7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.04■□□□□ 0.96
NKAIN3Q8N8D7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NKAIN3Q8N8D7 ERN1-208ENST00000606895 2068 ntBASIC21.03■□□□□ 0.96
NKAIN3Q8N8D7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NKAIN3Q8N8D7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NKAIN3Q8N8D7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NKAIN3Q8N8D7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NKAIN3Q8N8D7 AL162393.1-201ENST00000437852 946 ntBASIC21.03■□□□□ 0.96
NKAIN3Q8N8D7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.03■□□□□ 0.96
NKAIN3Q8N8D7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NKAIN3Q8N8D7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NKAIN3Q8N8D7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NKAIN3Q8N8D7 AC142381.3-201ENST00000568208 1670 ntBASIC21.02■□□□□ 0.96
NKAIN3Q8N8D7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NKAIN3Q8N8D7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.02■□□□□ 0.96
NKAIN3Q8N8D7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NKAIN3Q8N8D7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.02■□□□□ 0.96
NKAIN3Q8N8D7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
NKAIN3Q8N8D7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
NKAIN3Q8N8D7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NKAIN3Q8N8D7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NKAIN3Q8N8D7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NKAIN3Q8N8D7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NKAIN3Q8N8D7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NKAIN3Q8N8D7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.01■□□□□ 0.95
NKAIN3Q8N8D7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NKAIN3Q8N8D7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NKAIN3Q8N8D7 AC021231.2-201ENST00000594613 730 ntBASIC21.01■□□□□ 0.95
NKAIN3Q8N8D7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NKAIN3Q8N8D7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NKAIN3Q8N8D7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.01■□□□□ 0.95
NKAIN3Q8N8D7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NKAIN3Q8N8D7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21■□□□□ 0.95
NKAIN3Q8N8D7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21■□□□□ 0.95
NKAIN3Q8N8D7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NKAIN3Q8N8D7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21■□□□□ 0.95
NKAIN3Q8N8D7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.99■□□□□ 0.95
NKAIN3Q8N8D7 DUX4L29-201ENST00000425409 679 ntBASIC20.99■□□□□ 0.95
NKAIN3Q8N8D7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NKAIN3Q8N8D7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NKAIN3Q8N8D7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NKAIN3Q8N8D7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
NKAIN3Q8N8D7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
NKAIN3Q8N8D7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NKAIN3Q8N8D7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NKAIN3Q8N8D7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NKAIN3Q8N8D7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NKAIN3Q8N8D7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NKAIN3Q8N8D7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NKAIN3Q8N8D7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.97■□□□□ 0.95
NKAIN3Q8N8D7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NKAIN3Q8N8D7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
NKAIN3Q8N8D7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NKAIN3Q8N8D7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NKAIN3Q8N8D7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NKAIN3Q8N8D7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.96■□□□□ 0.95
NKAIN3Q8N8D7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
NKAIN3Q8N8D7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NKAIN3Q8N8D7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.96■□□□□ 0.95
NKAIN3Q8N8D7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
NKAIN3Q8N8D7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms