Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
CLDN22Q8N7P3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.29■■□□□ 1.16
CLDN22Q8N7P3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLDN22Q8N7P3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.29■■□□□ 1.16
CLDN22Q8N7P3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.29■■□□□ 1.16
CLDN22Q8N7P3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.29■■□□□ 1.16
CLDN22Q8N7P3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLDN22Q8N7P3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CLDN22Q8N7P3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CLDN22Q8N7P3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLDN22Q8N7P3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLDN22Q8N7P3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CLDN22Q8N7P3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.28■■□□□ 1.16
CLDN22Q8N7P3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLDN22Q8N7P3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLDN22Q8N7P3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLDN22Q8N7P3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLDN22Q8N7P3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
CLDN22Q8N7P3 LINC01971-201ENST00000617888 1048 ntBASIC22.26■■□□□ 1.15
CLDN22Q8N7P3 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.26■■□□□ 1.15
CLDN22Q8N7P3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.26■■□□□ 1.15
CLDN22Q8N7P3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.26■■□□□ 1.15
CLDN22Q8N7P3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLDN22Q8N7P3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
CLDN22Q8N7P3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLDN22Q8N7P3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CLDN22Q8N7P3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC22.25■■□□□ 1.15
CLDN22Q8N7P3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.25■■□□□ 1.15
CLDN22Q8N7P3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.25■■□□□ 1.15
CLDN22Q8N7P3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLDN22Q8N7P3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
CLDN22Q8N7P3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLDN22Q8N7P3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLDN22Q8N7P3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.24■■□□□ 1.15
CLDN22Q8N7P3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CLDN22Q8N7P3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLDN22Q8N7P3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLDN22Q8N7P3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLDN22Q8N7P3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLDN22Q8N7P3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.23■■□□□ 1.15
CLDN22Q8N7P3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.23■■□□□ 1.15
CLDN22Q8N7P3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLDN22Q8N7P3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLDN22Q8N7P3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
CLDN22Q8N7P3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.22■■□□□ 1.15
CLDN22Q8N7P3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CLDN22Q8N7P3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.21■■□□□ 1.15
CLDN22Q8N7P3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLDN22Q8N7P3 ZNRF2P2-203ENST00000454624 420 ntBASIC22.21■■□□□ 1.15
CLDN22Q8N7P3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CLDN22Q8N7P3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.21■■□□□ 1.15
CLDN22Q8N7P3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLDN22Q8N7P3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLDN22Q8N7P3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLDN22Q8N7P3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLDN22Q8N7P3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CLDN22Q8N7P3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.2■■□□□ 1.14
CLDN22Q8N7P3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.2■■□□□ 1.14
CLDN22Q8N7P3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLDN22Q8N7P3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLDN22Q8N7P3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
CLDN22Q8N7P3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLDN22Q8N7P3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLDN22Q8N7P3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CLDN22Q8N7P3 DUX4L13-201ENST00000554103 1267 ntBASIC22.19■■□□□ 1.14
CLDN22Q8N7P3 DUX4L15-201ENST00000611059 1267 ntBASIC22.19■■□□□ 1.14
CLDN22Q8N7P3 DUX4L11-201ENST00000611504 1267 ntBASIC22.19■■□□□ 1.14
CLDN22Q8N7P3 DUX4L12-201ENST00000614593 1267 ntBASIC22.19■■□□□ 1.14
CLDN22Q8N7P3 DUX4L23-201ENST00000615195 1269 ntBASIC22.19■■□□□ 1.14
CLDN22Q8N7P3 DUX4L24-201ENST00000617576 1269 ntBASIC22.19■■□□□ 1.14
CLDN22Q8N7P3 DUX4L22-201ENST00000618238 1269 ntBASIC22.19■■□□□ 1.14
CLDN22Q8N7P3 DUX4L20-201ENST00000619712 1269 ntBASIC22.19■■□□□ 1.14
CLDN22Q8N7P3 DUX4L14-201ENST00000621227 1267 ntBASIC22.19■■□□□ 1.14
CLDN22Q8N7P3 DUX4L21-201ENST00000622058 1269 ntBASIC22.19■■□□□ 1.14
CLDN22Q8N7P3 DUX4L10-201ENST00000622460 1267 ntBASIC22.19■■□□□ 1.14
CLDN22Q8N7P3 DUX4L25-201ENST00000624915 1269 ntBASIC22.19■■□□□ 1.14
CLDN22Q8N7P3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLDN22Q8N7P3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CLDN22Q8N7P3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CLDN22Q8N7P3 AC010501.1-201ENST00000606270 1962 ntBASIC22.18■■□□□ 1.14
CLDN22Q8N7P3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.17■■□□□ 1.14
CLDN22Q8N7P3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.17■■□□□ 1.14
CLDN22Q8N7P3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLDN22Q8N7P3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.17■■□□□ 1.14
CLDN22Q8N7P3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLDN22Q8N7P3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLDN22Q8N7P3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLDN22Q8N7P3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.17■■□□□ 1.14
CLDN22Q8N7P3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLDN22Q8N7P3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CLDN22Q8N7P3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CLDN22Q8N7P3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.16■■□□□ 1.14
CLDN22Q8N7P3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.16■■□□□ 1.14
CLDN22Q8N7P3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
CLDN22Q8N7P3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CLDN22Q8N7P3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
CLDN22Q8N7P3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CLDN22Q8N7P3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CLDN22Q8N7P3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
CLDN22Q8N7P3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms