Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
DHX40Q8IX18 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.31■■□□□ 1.96
DHX40Q8IX18 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
DHX40Q8IX18 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
DHX40Q8IX18 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
DHX40Q8IX18 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC27.3■■□□□ 1.96
DHX40Q8IX18 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
DHX40Q8IX18 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC27.29■■□□□ 1.96
DHX40Q8IX18 AC010501.1-201ENST00000606270 1962 ntBASIC27.29■■□□□ 1.96
DHX40Q8IX18 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC27.29■■□□□ 1.96
DHX40Q8IX18 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
DHX40Q8IX18 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
DHX40Q8IX18 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
DHX40Q8IX18 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
DHX40Q8IX18 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.28■■□□□ 1.96
DHX40Q8IX18 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
DHX40Q8IX18 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
DHX40Q8IX18 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
DHX40Q8IX18 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC27.27■■□□□ 1.96
DHX40Q8IX18 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC27.27■■□□□ 1.96
DHX40Q8IX18 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
DHX40Q8IX18 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
DHX40Q8IX18 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
DHX40Q8IX18 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC27.25■■□□□ 1.95
DHX40Q8IX18 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
DHX40Q8IX18 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
DHX40Q8IX18 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
DHX40Q8IX18 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
DHX40Q8IX18 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC27.23■■□□□ 1.95
DHX40Q8IX18 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
DHX40Q8IX18 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
DHX40Q8IX18 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
DHX40Q8IX18 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
DHX40Q8IX18 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
DHX40Q8IX18 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
DHX40Q8IX18 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
DHX40Q8IX18 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
DHX40Q8IX18 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC27.2■■□□□ 1.94
DHX40Q8IX18 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
DHX40Q8IX18 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.19■■□□□ 1.94
DHX40Q8IX18 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC27.18■■□□□ 1.94
DHX40Q8IX18 MED17-227ENST00000640521 2047 ntTSL 5 BASIC27.18■■□□□ 1.94
DHX40Q8IX18 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
DHX40Q8IX18 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
DHX40Q8IX18 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC27.18■■□□□ 1.94
DHX40Q8IX18 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
DHX40Q8IX18 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
DHX40Q8IX18 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
DHX40Q8IX18 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
DHX40Q8IX18 ABHD17AP4-201ENST00000411545 909 ntBASIC27.17■■□□□ 1.94
DHX40Q8IX18 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.17■■□□□ 1.94
DHX40Q8IX18 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
DHX40Q8IX18 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
DHX40Q8IX18 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC27.17■■□□□ 1.94
DHX40Q8IX18 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
DHX40Q8IX18 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
DHX40Q8IX18 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
DHX40Q8IX18 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC27.16■■□□□ 1.94
DHX40Q8IX18 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
DHX40Q8IX18 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
DHX40Q8IX18 AC142381.3-201ENST00000568208 1670 ntBASIC27.15■■□□□ 1.94
DHX40Q8IX18 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.15■■□□□ 1.94
DHX40Q8IX18 RPS2-210ENST00000530225 765 ntTSL 2 BASIC27.15■■□□□ 1.94
DHX40Q8IX18 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
DHX40Q8IX18 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
DHX40Q8IX18 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
DHX40Q8IX18 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
DHX40Q8IX18 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
DHX40Q8IX18 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.93
DHX40Q8IX18 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
DHX40Q8IX18 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.13■■□□□ 1.93
DHX40Q8IX18 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
DHX40Q8IX18 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
DHX40Q8IX18 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
DHX40Q8IX18 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
DHX40Q8IX18 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
DHX40Q8IX18 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC27.11■■□□□ 1.93
DHX40Q8IX18 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC27.11■■□□□ 1.93
DHX40Q8IX18 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
DHX40Q8IX18 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC27.11■■□□□ 1.93
DHX40Q8IX18 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
DHX40Q8IX18 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
DHX40Q8IX18 THRA-202ENST00000394121 2260 ntTSL 2 BASIC27.1■■□□□ 1.93
DHX40Q8IX18 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
DHX40Q8IX18 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
DHX40Q8IX18 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
DHX40Q8IX18 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
DHX40Q8IX18 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
DHX40Q8IX18 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
DHX40Q8IX18 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.09■■□□□ 1.93
DHX40Q8IX18 AC138932.3-201ENST00000567634 1902 ntBASIC27.09■■□□□ 1.93
DHX40Q8IX18 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC27.09■■□□□ 1.93
DHX40Q8IX18 AC022211.4-201ENST00000625094 2161 ntBASIC27.09■■□□□ 1.93
DHX40Q8IX18 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC27.09■■□□□ 1.93
DHX40Q8IX18 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
DHX40Q8IX18 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
DHX40Q8IX18 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
DHX40Q8IX18 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
DHX40Q8IX18 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
DHX40Q8IX18 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms