Protein–RNA interactions for Protein: Q8IWA5

SLC44A2, Choline transporter-like protein 2, humanhuman

Predicted RBP Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2Q8IWA5 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
SLC44A2Q8IWA5 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC44A2Q8IWA5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC44A2Q8IWA5 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SLC44A2Q8IWA5 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC44A2Q8IWA5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SLC44A2Q8IWA5 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SLC44A2Q8IWA5 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SLC44A2Q8IWA5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
SLC44A2Q8IWA5 MIR639-201ENST00000384974 98 ntBASIC23.14■■□□□ 1.29
SLC44A2Q8IWA5 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
SLC44A2Q8IWA5 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC44A2Q8IWA5 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC44A2Q8IWA5 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.13■■□□□ 1.29
SLC44A2Q8IWA5 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.13■■□□□ 1.29
SLC44A2Q8IWA5 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.13■■□□□ 1.29
SLC44A2Q8IWA5 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.13■■□□□ 1.29
SLC44A2Q8IWA5 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC44A2Q8IWA5 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.12■■□□□ 1.29
SLC44A2Q8IWA5 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.12■■□□□ 1.29
SLC44A2Q8IWA5 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
SLC44A2Q8IWA5 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.12■■□□□ 1.29
SLC44A2Q8IWA5 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC44A2Q8IWA5 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
SLC44A2Q8IWA5 AC091060.1-201ENST00000623524 1766 ntBASIC23.11■■□□□ 1.29
SLC44A2Q8IWA5 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC44A2Q8IWA5 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC44A2Q8IWA5 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.1■■□□□ 1.29
SLC44A2Q8IWA5 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC44A2Q8IWA5 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.1■■□□□ 1.29
SLC44A2Q8IWA5 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.1■■□□□ 1.29
SLC44A2Q8IWA5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.1■■□□□ 1.29
SLC44A2Q8IWA5 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC44A2Q8IWA5 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
SLC44A2Q8IWA5 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC44A2Q8IWA5 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
SLC44A2Q8IWA5 WHAMMP3-201ENST00000611636 1609 ntBASIC23.09■■□□□ 1.29
SLC44A2Q8IWA5 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.09■■□□□ 1.29
SLC44A2Q8IWA5 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.09■■□□□ 1.29
SLC44A2Q8IWA5 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC44A2Q8IWA5 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SLC44A2Q8IWA5 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SLC44A2Q8IWA5 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.29
SLC44A2Q8IWA5 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC44A2Q8IWA5 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC44A2Q8IWA5 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.08■■□□□ 1.28
SLC44A2Q8IWA5 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SLC44A2Q8IWA5 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
SLC44A2Q8IWA5 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.07■■□□□ 1.28
SLC44A2Q8IWA5 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SLC44A2Q8IWA5 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
SLC44A2Q8IWA5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC44A2Q8IWA5 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SLC44A2Q8IWA5 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SLC44A2Q8IWA5 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.05■■□□□ 1.28
SLC44A2Q8IWA5 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SLC44A2Q8IWA5 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC44A2Q8IWA5 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC44A2Q8IWA5 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.04■■□□□ 1.28
SLC44A2Q8IWA5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC44A2Q8IWA5 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SLC44A2Q8IWA5 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.04■■□□□ 1.28
SLC44A2Q8IWA5 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC44A2Q8IWA5 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC44A2Q8IWA5 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC44A2Q8IWA5 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.03■■□□□ 1.28
SLC44A2Q8IWA5 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SLC44A2Q8IWA5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC44A2Q8IWA5 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
SLC44A2Q8IWA5 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SLC44A2Q8IWA5 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SLC44A2Q8IWA5 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.02■■□□□ 1.28
SLC44A2Q8IWA5 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SLC44A2Q8IWA5 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
SLC44A2Q8IWA5 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SLC44A2Q8IWA5 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SLC44A2Q8IWA5 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
SLC44A2Q8IWA5 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.01■■□□□ 1.27
SLC44A2Q8IWA5 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
SLC44A2Q8IWA5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SLC44A2Q8IWA5 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SLC44A2Q8IWA5 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SLC44A2Q8IWA5 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SLC44A2Q8IWA5 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.01■■□□□ 1.27
SLC44A2Q8IWA5 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SLC44A2Q8IWA5 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SLC44A2Q8IWA5 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SLC44A2Q8IWA5 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SLC44A2Q8IWA5 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SLC44A2Q8IWA5 AC142472.1-201ENST00000612013 1741 ntBASIC23■■□□□ 1.27
SLC44A2Q8IWA5 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SLC44A2Q8IWA5 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23■■□□□ 1.27
SLC44A2Q8IWA5 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23■■□□□ 1.27
SLC44A2Q8IWA5 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SLC44A2Q8IWA5 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
SLC44A2Q8IWA5 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SLC44A2Q8IWA5 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.98■■□□□ 1.27
SLC44A2Q8IWA5 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.98■■□□□ 1.27
SLC44A2Q8IWA5 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SLC44A2Q8IWA5 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms