Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.42■■□□□ 1.5
RAPH1Q70E73 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
RAPH1Q70E73 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RAPH1Q70E73 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RAPH1Q70E73 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RAPH1Q70E73 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
RAPH1Q70E73 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RAPH1Q70E73 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
RAPH1Q70E73 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RAPH1Q70E73 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RAPH1Q70E73 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.41■■□□□ 1.5
RAPH1Q70E73 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.41■■□□□ 1.5
RAPH1Q70E73 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RAPH1Q70E73 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.41■■□□□ 1.5
RAPH1Q70E73 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RAPH1Q70E73 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
RAPH1Q70E73 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
RAPH1Q70E73 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RAPH1Q70E73 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
RAPH1Q70E73 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
RAPH1Q70E73 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.4■■□□□ 1.5
RAPH1Q70E73 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RAPH1Q70E73 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
RAPH1Q70E73 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.4■■□□□ 1.5
RAPH1Q70E73 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
RAPH1Q70E73 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RAPH1Q70E73 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RAPH1Q70E73 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RAPH1Q70E73 DUX4L13-201ENST00000554103 1267 ntBASIC24.39■■□□□ 1.49
RAPH1Q70E73 DUX4L15-201ENST00000611059 1267 ntBASIC24.39■■□□□ 1.49
RAPH1Q70E73 DUX4L23-201ENST00000615195 1269 ntBASIC24.39■■□□□ 1.49
RAPH1Q70E73 DUX4L24-201ENST00000617576 1269 ntBASIC24.39■■□□□ 1.49
RAPH1Q70E73 DUX4L22-201ENST00000618238 1269 ntBASIC24.39■■□□□ 1.49
RAPH1Q70E73 DUX4L20-201ENST00000619712 1269 ntBASIC24.39■■□□□ 1.49
RAPH1Q70E73 DUX4L21-201ENST00000622058 1269 ntBASIC24.39■■□□□ 1.49
RAPH1Q70E73 DUX4L10-201ENST00000622460 1267 ntBASIC24.39■■□□□ 1.49
RAPH1Q70E73 DUX4L25-201ENST00000624915 1269 ntBASIC24.39■■□□□ 1.49
RAPH1Q70E73 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
RAPH1Q70E73 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
RAPH1Q70E73 AC020928.2-201ENST00000588717 2197 ntBASIC24.39■■□□□ 1.49
RAPH1Q70E73 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RAPH1Q70E73 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RAPH1Q70E73 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPH1Q70E73 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPH1Q70E73 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPH1Q70E73 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.38■■□□□ 1.49
RAPH1Q70E73 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPH1Q70E73 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPH1Q70E73 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPH1Q70E73 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPH1Q70E73 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RAPH1Q70E73 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RAPH1Q70E73 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAPH1Q70E73 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RAPH1Q70E73 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.37■■□□□ 1.49
RAPH1Q70E73 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RAPH1Q70E73 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RAPH1Q70E73 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RAPH1Q70E73 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.37■■□□□ 1.49
RAPH1Q70E73 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RAPH1Q70E73 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RAPH1Q70E73 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
RAPH1Q70E73 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RAPH1Q70E73 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.36■■□□□ 1.49
RAPH1Q70E73 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.36■■□□□ 1.49
RAPH1Q70E73 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.36■■□□□ 1.49
RAPH1Q70E73 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
RAPH1Q70E73 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
RAPH1Q70E73 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RAPH1Q70E73 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RAPH1Q70E73 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.35■■□□□ 1.49
RAPH1Q70E73 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RAPH1Q70E73 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RAPH1Q70E73 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.34■■□□□ 1.49
RAPH1Q70E73 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.34■■□□□ 1.49
RAPH1Q70E73 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.34■■□□□ 1.49
RAPH1Q70E73 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RAPH1Q70E73 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
RAPH1Q70E73 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
RAPH1Q70E73 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.33■■□□□ 1.49
RAPH1Q70E73 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RAPH1Q70E73 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.33■■□□□ 1.49
RAPH1Q70E73 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.33■■□□□ 1.49
RAPH1Q70E73 AC008813.1-201ENST00000536597 885 ntBASIC24.33■■□□□ 1.49
RAPH1Q70E73 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RAPH1Q70E73 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
RAPH1Q70E73 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.32■■□□□ 1.48
RAPH1Q70E73 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RAPH1Q70E73 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RAPH1Q70E73 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
RAPH1Q70E73 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RAPH1Q70E73 DUX4L11-201ENST00000611504 1267 ntBASIC24.32■■□□□ 1.48
RAPH1Q70E73 DUX4L12-201ENST00000614593 1267 ntBASIC24.32■■□□□ 1.48
RAPH1Q70E73 DUX4L14-201ENST00000621227 1267 ntBASIC24.32■■□□□ 1.48
RAPH1Q70E73 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RAPH1Q70E73 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.32■■□□□ 1.48
RAPH1Q70E73 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
RAPH1Q70E73 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RAPH1Q70E73 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RAPH1Q70E73 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms