Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
TRIM60Q495X7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC27.44■■□□□ 1.98
TRIM60Q495X7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
TRIM60Q495X7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
TRIM60Q495X7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
TRIM60Q495X7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
TRIM60Q495X7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
TRIM60Q495X7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
TRIM60Q495X7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
TRIM60Q495X7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
TRIM60Q495X7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
TRIM60Q495X7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
TRIM60Q495X7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
TRIM60Q495X7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TRIM60Q495X7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC27.41■■□□□ 1.98
TRIM60Q495X7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TRIM60Q495X7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.41■■□□□ 1.98
TRIM60Q495X7 ST7-AS1-201ENST00000456775 1889 ntBASIC27.41■■□□□ 1.98
TRIM60Q495X7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TRIM60Q495X7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TRIM60Q495X7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.4■■□□□ 1.98
TRIM60Q495X7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
TRIM60Q495X7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC27.4■■□□□ 1.98
TRIM60Q495X7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC27.4■■□□□ 1.98
TRIM60Q495X7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
TRIM60Q495X7 AC008406.3-201ENST00000620001 1374 ntBASIC27.39■■□□□ 1.98
TRIM60Q495X7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
TRIM60Q495X7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC27.39■■□□□ 1.98
TRIM60Q495X7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TRIM60Q495X7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC27.39■■□□□ 1.98
TRIM60Q495X7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TRIM60Q495X7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TRIM60Q495X7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC27.38■■□□□ 1.97
TRIM60Q495X7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC27.38■■□□□ 1.97
TRIM60Q495X7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.37■■□□□ 1.97
TRIM60Q495X7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
TRIM60Q495X7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
TRIM60Q495X7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
TRIM60Q495X7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC27.36■■□□□ 1.97
TRIM60Q495X7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TRIM60Q495X7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TRIM60Q495X7 AL359504.2-201ENST00000605506 1601 ntBASIC27.35■■□□□ 1.97
TRIM60Q495X7 AC019171.1-201ENST00000601251 1056 ntBASIC27.35■■□□□ 1.97
TRIM60Q495X7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
TRIM60Q495X7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
TRIM60Q495X7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC27.34■■□□□ 1.97
TRIM60Q495X7 GRAMD4P7-201ENST00000578182 1232 ntBASIC27.34■■□□□ 1.97
TRIM60Q495X7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TRIM60Q495X7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
TRIM60Q495X7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC27.33■■□□□ 1.97
TRIM60Q495X7 Z92544.1-202ENST00000571933 1220 ntBASIC27.33■■□□□ 1.97
TRIM60Q495X7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
TRIM60Q495X7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TRIM60Q495X7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
TRIM60Q495X7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC27.32■■□□□ 1.96
TRIM60Q495X7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TRIM60Q495X7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TRIM60Q495X7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TRIM60Q495X7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
TRIM60Q495X7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC27.3■■□□□ 1.96
TRIM60Q495X7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC27.3■■□□□ 1.96
TRIM60Q495X7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.3■■□□□ 1.96
TRIM60Q495X7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC27.29■■□□□ 1.96
TRIM60Q495X7 AC087393.1-201ENST00000582896 145 ntBASIC27.29■■□□□ 1.96
TRIM60Q495X7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC27.29■■□□□ 1.96
TRIM60Q495X7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
TRIM60Q495X7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.28■■□□□ 1.96
TRIM60Q495X7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC27.28■■□□□ 1.96
TRIM60Q495X7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
TRIM60Q495X7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC27.28■■□□□ 1.96
TRIM60Q495X7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
TRIM60Q495X7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
TRIM60Q495X7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TRIM60Q495X7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC27.25■■□□□ 1.95
TRIM60Q495X7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC27.25■■□□□ 1.95
TRIM60Q495X7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TRIM60Q495X7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
TRIM60Q495X7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
TRIM60Q495X7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC27.24■■□□□ 1.95
TRIM60Q495X7 AP002414.2-202ENST00000590929 1450 ntBASIC27.24■■□□□ 1.95
TRIM60Q495X7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC27.23■■□□□ 1.95
TRIM60Q495X7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TRIM60Q495X7 ABCB10P3-201ENST00000561950 2166 ntBASIC27.23■■□□□ 1.95
TRIM60Q495X7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TRIM60Q495X7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
TRIM60Q495X7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
TRIM60Q495X7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TRIM60Q495X7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
TRIM60Q495X7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
TRIM60Q495X7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
TRIM60Q495X7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
TRIM60Q495X7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
TRIM60Q495X7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
TRIM60Q495X7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
TRIM60Q495X7 LONRF2P2-201ENST00000439212 571 ntBASIC27.2■■□□□ 1.94
TRIM60Q495X7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.94
TRIM60Q495X7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
TRIM60Q495X7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
TRIM60Q495X7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TRIM60Q495X7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms