Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 YMR034CYMR034C 1305 nt6.63□□□□□ -1.35
RUP1Q12242 BRN1YBL097W 2265 nt6.63□□□□□ -1.35
RUP1Q12242 SMC5YOL034W 3282 nt6.63□□□□□ -1.35
RUP1Q12242 YBR113WYBR113W 483 nt6.63□□□□□ -1.35
RUP1Q12242 HEM1YDR232W 1647 nt6.62□□□□□ -1.35
RUP1Q12242 APE4YHR113W 1473 nt6.62□□□□□ -1.35
RUP1Q12242 CBR1YIL043C 855 nt6.62□□□□□ -1.35
RUP1Q12242 tG(GCC)BtG(GCC)B 71 nt6.61□□□□□ -1.35
RUP1Q12242 SUF16tG(GCC)C 71 nt6.61□□□□□ -1.35
RUP1Q12242 tG(GCC)D1tG(GCC)D1 71 nt6.61□□□□□ -1.35
RUP1Q12242 tG(GCC)D2tG(GCC)D2 71 nt6.61□□□□□ -1.35
RUP1Q12242 tG(GCC)EtG(GCC)E 71 nt6.61□□□□□ -1.35
RUP1Q12242 SUF20tG(GCC)F1 71 nt6.61□□□□□ -1.35
RUP1Q12242 tG(GCC)F2tG(GCC)F2 71 nt6.61□□□□□ -1.35
RUP1Q12242 tG(GCC)G1tG(GCC)G1 71 nt6.61□□□□□ -1.35
RUP1Q12242 tG(GCC)G2tG(GCC)G2 71 nt6.61□□□□□ -1.35
RUP1Q12242 tG(GCC)J1tG(GCC)J1 71 nt6.61□□□□□ -1.35
RUP1Q12242 SUF23tG(GCC)J2 71 nt6.61□□□□□ -1.35
RUP1Q12242 tG(GCC)MtG(GCC)M 71 nt6.61□□□□□ -1.35
RUP1Q12242 tG(GCC)O1tG(GCC)O1 71 nt6.61□□□□□ -1.35
RUP1Q12242 SUF17tG(GCC)O2 71 nt6.61□□□□□ -1.35
RUP1Q12242 tG(GCC)P1tG(GCC)P1 71 nt6.61□□□□□ -1.35
RUP1Q12242 tG(GCC)P2tG(GCC)P2 71 nt6.61□□□□□ -1.35
RUP1Q12242 YPT1YFL038C 621 nt6.61□□□□□ -1.35
RUP1Q12242 HEL1YKR017C 1656 nt6.61□□□□□ -1.35
RUP1Q12242 REC107YJR021C 945 nt6.6□□□□□ -1.35
RUP1Q12242 PEX13YLR191W 1161 nt6.6□□□□□ -1.35
RUP1Q12242 AAD14YNL331C 1131 nt6.6□□□□□ -1.35
RUP1Q12242 LGE1YPL055C 999 nt6.6□□□□□ -1.35
RUP1Q12242 HXT2YMR011W 1626 nt6.6□□□□□ -1.35
RUP1Q12242 RPL31BYLR406C 342 nt6.59□□□□□ -1.35
RUP1Q12242 YNR005CYNR005C 405 nt6.59□□□□□ -1.35
RUP1Q12242 NTG2YOL043C 1143 nt6.59□□□□□ -1.35
RUP1Q12242 GEF1YJR040W 2340 nt6.58□□□□□ -1.36
RUP1Q12242 PTC7YHR076W 1032 nt6.58□□□□□ -1.36
RUP1Q12242 ERG10YPL028W 1197 nt6.58□□□□□ -1.36
RUP1Q12242 SPE3YPR069C 882 nt6.58□□□□□ -1.36
RUP1Q12242 YJL163CYJL163C 1668 nt6.58□□□□□ -1.36
RUP1Q12242 YEN1YER041W 2280 nt6.57□□□□□ -1.36
RUP1Q12242 ATG22YCL038C 1587 nt6.57□□□□□ -1.36
RUP1Q12242 BIM1YER016W 1035 nt6.57□□□□□ -1.36
RUP1Q12242 MIA40YKL195W 1212 nt6.57□□□□□ -1.36
RUP1Q12242 IDP3YNL009W 1263 nt6.57□□□□□ -1.36
RUP1Q12242 UTR2YEL040W 1404 nt6.57□□□□□ -1.36
RUP1Q12242 YHR020WYHR020W 2067 nt6.56□□□□□ -1.36
RUP1Q12242 YIL055CYIL055C 1884 nt6.56□□□□□ -1.36
RUP1Q12242 MRPS28YDR337W 861 nt6.56□□□□□ -1.36
RUP1Q12242 CIS3YJL158C 684 nt6.56□□□□□ -1.36
RUP1Q12242 FBA1YKL060C 1080 nt6.56□□□□□ -1.36
RUP1Q12242 DFR1YOR236W 636 nt6.56□□□□□ -1.36
RUP1Q12242 FIT2YOR382W 462 nt6.56□□□□□ -1.36
RUP1Q12242 PUS4YNL292W 1212 nt6.55□□□□□ -1.36
RUP1Q12242 YOL046CYOL046C 675 nt6.55□□□□□ -1.36
RUP1Q12242 IMA5YJL216C 1746 nt6.55□□□□□ -1.36
RUP1Q12242 TPO3YPR156C 1869 nt6.55□□□□□ -1.36
RUP1Q12242 STT3YGL022W 2157 nt6.55□□□□□ -1.36
RUP1Q12242 CRP1YHR146W 1398 nt6.55□□□□□ -1.36
RUP1Q12242 HDA1YNL021W 2121 nt6.55□□□□□ -1.36
RUP1Q12242 ICS3YJL077C 396 nt6.54□□□□□ -1.36
RUP1Q12242 DUS4YLR405W 1104 nt6.54□□□□□ -1.36
RUP1Q12242 THI2YBR240C 1353 nt6.54□□□□□ -1.36
RUP1Q12242 MPH3YJR160C 1809 nt6.53□□□□□ -1.36
RUP1Q12242 PPM1YDR435C 987 nt6.53□□□□□ -1.36
RUP1Q12242 COG1YGL223C 1254 nt6.53□□□□□ -1.36
RUP1Q12242 EDE1YBL047C 4146 nt6.52□□□□□ -1.36
RUP1Q12242 DAL7YIR031C 1665 nt6.52□□□□□ -1.37
RUP1Q12242 BIO3YNR058W 1443 nt6.52□□□□□ -1.37
RUP1Q12242 YIP4YGL198W 708 nt6.52□□□□□ -1.37
RUP1Q12242 RPP1YHR062C 882 nt6.52□□□□□ -1.37
RUP1Q12242 FAF1YIL019W 1041 nt6.52□□□□□ -1.37
RUP1Q12242 YPR076WYPR076W 375 nt6.52□□□□□ -1.37
RUP1Q12242 PLB3YOL011W 2061 nt6.52□□□□□ -1.37
RUP1Q12242 COX15YER141W 1461 nt6.52□□□□□ -1.37
RUP1Q12242 YLL058WYLL058W 1728 nt6.51□□□□□ -1.37
RUP1Q12242 LDB7YBL006C 543 nt6.51□□□□□ -1.37
RUP1Q12242 PPM2YOL141W 2088 nt6.51□□□□□ -1.37
RUP1Q12242 SGE1YPR198W 1632 nt6.5□□□□□ -1.37
RUP1Q12242 YML133CYML133C 4125 nt6.5□□□□□ -1.37
RUP1Q12242 MOD5YOR274W 1287 nt6.5□□□□□ -1.37
RUP1Q12242 PDR18YNR070W 4002 nt6.49□□□□□ -1.37
RUP1Q12242 AGX1YFL030W 1158 nt6.49□□□□□ -1.37
RUP1Q12242 DMA1YHR115C 1251 nt6.49□□□□□ -1.37
RUP1Q12242 SQT1YIR012W 1296 nt6.49□□□□□ -1.37
RUP1Q12242 ATG36YJL185C 882 nt6.49□□□□□ -1.37
RUP1Q12242 YML6YML025C 861 nt6.49□□□□□ -1.37
RUP1Q12242 TMA46YOR091W 1038 nt6.49□□□□□ -1.37
RUP1Q12242 SGV1YPR161C 1974 nt6.49□□□□□ -1.37
RUP1Q12242 PPH21YDL134C 1110 nt6.48□□□□□ -1.37
RUP1Q12242 ASR1YPR093C 867 nt6.48□□□□□ -1.37
RUP1Q12242 YTH1YPR107C 627 nt6.48□□□□□ -1.37
RUP1Q12242 RGD1YBR260C 2001 nt6.48□□□□□ -1.37
RUP1Q12242 CYC8YBR112C 2901 nt6.48□□□□□ -1.37
RUP1Q12242 MSY1YPL097W 1479 nt6.47□□□□□ -1.37
RUP1Q12242 YGL102CYGL102C 429 nt6.47□□□□□ -1.37
RUP1Q12242 YLR123CYLR123C 330 nt6.47□□□□□ -1.37
RUP1Q12242 NUP49YGL172W 1419 nt6.47□□□□□ -1.37
RUP1Q12242 CSC1YLR241W 2349 nt6.47□□□□□ -1.37
RUP1Q12242 YLR312CYLR312C 1197 nt6.46□□□□□ -1.38
RUP1Q12242 SMX3YPR182W 261 nt6.46□□□□□ -1.38
RUP1Q12242 YBR284WYBR284W 2394 nt6.46□□□□□ -1.38
Retrieved 100 of 7,029 protein–RNA pairs in 10.2 ms