Protein–RNA interactions for Protein: Q02260

SMD1, Small nuclear ribonucleoprotein Sm D1, yeastyeast

Predicted RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD1Q02260 CEF1YMR213W 1773 nt4.8□□□□□ -1.64
SMD1Q02260 ELP3YPL086C 1674 nt4.8□□□□□ -1.64
SMD1Q02260 PAC2YER007W 1557 nt4.79□□□□□ -1.64
SMD1Q02260 HPT1YDR399W 666 nt4.79□□□□□ -1.64
SMD1Q02260 DOC1YGL240W 753 nt4.79□□□□□ -1.64
SMD1Q02260 RIB1YBL033C 1038 nt4.79□□□□□ -1.64
SMD1Q02260 OPI11YPR044C 354 nt4.79□□□□□ -1.64
SMD1Q02260 SMK1YPR054W 1167 nt4.79□□□□□ -1.64
SMD1Q02260 GDA1YEL042W 1557 nt4.78□□□□□ -1.64
SMD1Q02260 TUF1YOR187W 1314 nt4.78□□□□□ -1.64
SMD1Q02260 SKN1YGR143W 2316 nt4.78□□□□□ -1.64
SMD1Q02260 YCR049CYCR049C 447 nt4.78□□□□□ -1.64
SMD1Q02260 TRS31YDR472W 852 nt4.78□□□□□ -1.64
SMD1Q02260 OPI8YKR035C 642 nt4.78□□□□□ -1.64
SMD1Q02260 CWC27YPL064C 906 nt4.78□□□□□ -1.64
SMD1Q02260 HOG1YLR113W 1308 nt4.77□□□□□ -1.65
SMD1Q02260 tL(UAA)B1tL(UAA)B1 84 nt4.77□□□□□ -1.65
SMD1Q02260 tL(UAA)B2tL(UAA)B2 84 nt4.77□□□□□ -1.65
SMD1Q02260 tL(UAA)DtL(UAA)D 84 nt4.77□□□□□ -1.65
SMD1Q02260 SUP51tL(UAA)J 84 nt4.77□□□□□ -1.65
SMD1Q02260 tL(UAA)KtL(UAA)K 84 nt4.77□□□□□ -1.65
SMD1Q02260 tL(UAA)LtL(UAA)L 84 nt4.77□□□□□ -1.65
SMD1Q02260 tL(UAA)NtL(UAA)N 84 nt4.77□□□□□ -1.65
SMD1Q02260 PAU21YOR394W 495 nt4.77□□□□□ -1.65
SMD1Q02260 PAU22YPL282C 495 nt4.77□□□□□ -1.65
SMD1Q02260 BDF2YDL070W 1917 nt4.77□□□□□ -1.65
SMD1Q02260 TEL2YGR099W 2067 nt4.77□□□□□ -1.65
SMD1Q02260 YPL247CYPL247C 1572 nt4.77□□□□□ -1.65
SMD1Q02260 ASN1YPR145W 1719 nt4.77□□□□□ -1.65
SMD1Q02260 TKL1YPR074C 2043 nt4.77□□□□□ -1.65
SMD1Q02260 YLL066CYLL066C 3618 nt4.76□□□□□ -1.65
SMD1Q02260 HIS1YER055C 894 nt4.76□□□□□ -1.65
SMD1Q02260 YOL099CYOL099C 492 nt4.76□□□□□ -1.65
SMD1Q02260 SAC6YDR129C 1929 nt4.76□□□□□ -1.65
SMD1Q02260 MIP1YOR330C 3765 nt4.75□□□□□ -1.65
SMD1Q02260 DML1YMR211W 1428 nt4.75□□□□□ -1.65
SMD1Q02260 SOD2YHR008C 702 nt4.75□□□□□ -1.65
SMD1Q02260 NCA3YJL116C 1014 nt4.75□□□□□ -1.65
SMD1Q02260 GCN3YKR026C 918 nt4.75□□□□□ -1.65
SMD1Q02260 GET4YOR164C 939 nt4.75□□□□□ -1.65
SMD1Q02260 YBR124WYBR124W 360 nt4.75□□□□□ -1.65
SMD1Q02260 QNS1YHR074W 2145 nt4.75□□□□□ -1.65
SMD1Q02260 PLB2YMR006C 2121 nt4.75□□□□□ -1.65
SMD1Q02260 VTH1YIL173W 4650 nt4.75□□□□□ -1.65
SMD1Q02260 VTH2YJL222W 4650 nt4.75□□□□□ -1.65
SMD1Q02260 AI5_BETAQ0075 1065 nt4.74□□□□□ -1.65
SMD1Q02260 LCP5YER127W 1074 nt4.74□□□□□ -1.65
SMD1Q02260 RGD2YFL047W 2145 nt4.74□□□□□ -1.65
SMD1Q02260 OST3YOR085W 1053 nt4.74□□□□□ -1.65
SMD1Q02260 YMR034CYMR034C 1305 nt4.73□□□□□ -1.65
SMD1Q02260 YDL177CYDL177C 513 nt4.73□□□□□ -1.65
SMD1Q02260 PIH1YHR034C 1035 nt4.73□□□□□ -1.65
SMD1Q02260 CDC11YJR076C 1248 nt4.73□□□□□ -1.65
SMD1Q02260 SWP1YMR149W 861 nt4.73□□□□□ -1.65
SMD1Q02260 SPG5YMR191W 1122 nt4.73□□□□□ -1.65
SMD1Q02260 PTH2YBL057C 627 nt4.73□□□□□ -1.65
SMD1Q02260 YOR343CYOR343C 327 nt4.73□□□□□ -1.65
SMD1Q02260 SPS22YCL048W 1392 nt4.73□□□□□ -1.65
SMD1Q02260 KTR5YNL029C 1569 nt4.73□□□□□ -1.65
SMD1Q02260 FAT3YKL187C 2253 nt4.72□□□□□ -1.65
SMD1Q02260 PAT1YCR077C 2391 nt4.72□□□□□ -1.65
SMD1Q02260 GAA1YLR088W 1845 nt4.72□□□□□ -1.65
SMD1Q02260 GUF1YLR289W 1938 nt4.72□□□□□ -1.65
SMD1Q02260 MSN2YMR037C 2115 nt4.72□□□□□ -1.65
SMD1Q02260 GPT2YKR067W 2232 nt4.72□□□□□ -1.65
SMD1Q02260 YFL013W-AYFL013W-A 804 nt4.72□□□□□ -1.65
SMD1Q02260 YAL016C-AYAL016C-A 315 nt4.72□□□□□ -1.65
SMD1Q02260 YKR032WYKR032W 315 nt4.72□□□□□ -1.65
SMD1Q02260 ATP23YNR020C 813 nt4.72□□□□□ -1.65
SMD1Q02260 NTG2YOL043C 1143 nt4.72□□□□□ -1.65
SMD1Q02260 HSP12YFL014W 330 nt4.71□□□□□ -1.66
SMD1Q02260 YSC83YHR017W 1158 nt4.71□□□□□ -1.66
SMD1Q02260 PTC7YHR076W 1032 nt4.71□□□□□ -1.66
SMD1Q02260 CTF8YHR191C 402 nt4.71□□□□□ -1.66
SMD1Q02260 YJL211CYJL211C 444 nt4.71□□□□□ -1.66
SMD1Q02260 HTZ1YOL012C 405 nt4.71□□□□□ -1.66
SMD1Q02260 MRP51YPL118W 1035 nt4.71□□□□□ -1.66
SMD1Q02260 ECM38YLR299W 1983 nt4.71□□□□□ -1.66
SMD1Q02260 PAP2YOL115W 1755 nt4.7□□□□□ -1.66
SMD1Q02260 CRZ1YNL027W 2037 nt4.7□□□□□ -1.66
SMD1Q02260 APE4YHR113W 1473 nt4.7□□□□□ -1.66
SMD1Q02260 TIM22YDL217C 624 nt4.7□□□□□ -1.66
SMD1Q02260 MRPS28YDR337W 861 nt4.7□□□□□ -1.66
SMD1Q02260 YJL144WYJL144W 315 nt4.7□□□□□ -1.66
SMD1Q02260 YLR358CYLR358C 564 nt4.7□□□□□ -1.66
SMD1Q02260 CUE4YML101C 354 nt4.7□□□□□ -1.66
SMD1Q02260 RDL2YOR286W 450 nt4.7□□□□□ -1.66
SMD1Q02260 RPL5YPL131W 894 nt4.7□□□□□ -1.66
SMD1Q02260 KNS1YLL019C 2214 nt4.7□□□□□ -1.66
SMD1Q02260 CHS5YLR330W 2016 nt4.7□□□□□ -1.66
SMD1Q02260 YOL036WYOL036W 2286 nt4.7□□□□□ -1.66
SMD1Q02260 LSG1YGL099W 1923 nt4.7□□□□□ -1.66
SMD1Q02260 EEB1YPL095C 1371 nt4.69□□□□□ -1.66
SMD1Q02260 ORM1YGR038W 669 nt4.69□□□□□ -1.66
SMD1Q02260 YPL067CYPL067C 597 nt4.69□□□□□ -1.66
SMD1Q02260 YPR204WYPR204W 3099 nt4.69□□□□□ -1.66
SMD1Q02260 RAP1YNL216W 2484 nt4.69□□□□□ -1.66
SMD1Q02260 CMR1YDL156W 1569 nt4.69□□□□□ -1.66
SMD1Q02260 RIO1YOR119C 1455 nt4.69□□□□□ -1.66
SMD1Q02260 YFL052WYFL052W 1398 nt4.68□□□□□ -1.66
Retrieved 100 of 7,029 protein–RNA pairs in 26.3 ms