Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC25A1P53007 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC25A1P53007 AC135731.1-201ENST00000569415 2548 ntBASIC21.81■■□□□ 1.08
SLC25A1P53007 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC25A1P53007 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
SLC25A1P53007 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC25A1P53007 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC25A1P53007 AC148477.6-201ENST00000623746 465 ntBASIC21.81■■□□□ 1.08
SLC25A1P53007 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC25A1P53007 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC25A1P53007 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC25A1P53007 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC25A1P53007 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC25A1P53007 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.8■■□□□ 1.08
SLC25A1P53007 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC25A1P53007 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC25A1P53007 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC25A1P53007 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
SLC25A1P53007 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SLC25A1P53007 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SLC25A1P53007 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC25A1P53007 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC25A1P53007 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC25A1P53007 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC25A1P53007 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.79■■□□□ 1.08
SLC25A1P53007 DUX4L11-201ENST00000611504 1267 ntBASIC21.79■■□□□ 1.08
SLC25A1P53007 DUX4L12-201ENST00000614593 1267 ntBASIC21.79■■□□□ 1.08
SLC25A1P53007 DUX4L14-201ENST00000621227 1267 ntBASIC21.79■■□□□ 1.08
SLC25A1P53007 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC25A1P53007 AC010501.1-201ENST00000606270 1962 ntBASIC21.79■■□□□ 1.08
SLC25A1P53007 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.78■■□□□ 1.08
SLC25A1P53007 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.78■■□□□ 1.08
SLC25A1P53007 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC25A1P53007 MIR219A2-201ENST00000608502 1504 ntBASIC21.78■■□□□ 1.08
SLC25A1P53007 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.78■■□□□ 1.08
SLC25A1P53007 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SLC25A1P53007 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC25A1P53007 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.77■■□□□ 1.08
SLC25A1P53007 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC25A1P53007 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC25A1P53007 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.77■■□□□ 1.08
SLC25A1P53007 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.77■■□□□ 1.08
SLC25A1P53007 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC25A1P53007 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC25A1P53007 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC25A1P53007 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC25A1P53007 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC25A1P53007 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC25A1P53007 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC25A1P53007 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.75■■□□□ 1.07
SLC25A1P53007 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC25A1P53007 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SLC25A1P53007 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.75■■□□□ 1.07
SLC25A1P53007 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC25A1P53007 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC25A1P53007 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
SLC25A1P53007 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC25A1P53007 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC25A1P53007 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC25A1P53007 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC25A1P53007 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC25A1P53007 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC25A1P53007 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SLC25A1P53007 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC25A1P53007 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC25A1P53007 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.73■■□□□ 1.07
SLC25A1P53007 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC25A1P53007 ERN1-208ENST00000606895 2068 ntBASIC21.73■■□□□ 1.07
SLC25A1P53007 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC25A1P53007 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC25A1P53007 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC25A1P53007 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.72■■□□□ 1.07
SLC25A1P53007 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.72■■□□□ 1.07
SLC25A1P53007 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC25A1P53007 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC25A1P53007 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC25A1P53007 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC25A1P53007 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC25A1P53007 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC25A1P53007 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC25A1P53007 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC25A1P53007 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC25A1P53007 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC25A1P53007 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.71■■□□□ 1.07
SLC25A1P53007 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC25A1P53007 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC25A1P53007 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC25A1P53007 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC25A1P53007 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC25A1P53007 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SLC25A1P53007 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.7■■□□□ 1.06
SLC25A1P53007 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC25A1P53007 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
SLC25A1P53007 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SLC25A1P53007 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SLC25A1P53007 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC25A1P53007 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SLC25A1P53007 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC25A1P53007 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
SLC25A1P53007 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms