Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 YML018CYML018C 1182 nt9.43□□□□□ -0.9
SSM4P40318 OGG1YML060W 1131 nt9.43□□□□□ -0.9
SSM4P40318 YNR014WYNR014W 639 nt9.43□□□□□ -0.9
SSM4P40318 YHK8YHR048W 1545 nt9.41□□□□□ -0.9
SSM4P40318 ATG36YJL185C 882 nt9.41□□□□□ -0.9
SSM4P40318 MSO1YNR049C 633 nt9.41□□□□□ -0.9
SSM4P40318 TAH11YJR046W 1815 nt9.41□□□□□ -0.9
SSM4P40318 SPG1YGR236C 288 nt9.4□□□□□ -0.9
SSM4P40318 MPC2YHR162W 390 nt9.4□□□□□ -0.9
SSM4P40318 YJR146WYJR146W 354 nt9.4□□□□□ -0.9
SSM4P40318 EDE1YBL047C 4146 nt9.39□□□□□ -0.91
SSM4P40318 HEM1YDR232W 1647 nt9.39□□□□□ -0.91
SSM4P40318 CUP2YGL166W 678 nt9.39□□□□□ -0.91
SSM4P40318 NTG1YAL015C 1200 nt9.39□□□□□ -0.91
SSM4P40318 DFR1YOR236W 636 nt9.39□□□□□ -0.91
SSM4P40318 SGF29YCL010C 780 nt9.39□□□□□ -0.91
SSM4P40318 CCC2YDR270W 3015 nt9.39□□□□□ -0.91
SSM4P40318 YGR054WYGR054W 1929 nt9.39□□□□□ -0.91
SSM4P40318 PTC3YBL056W 1407 nt9.38□□□□□ -0.91
SSM4P40318 VMA3YEL027W 483 nt9.38□□□□□ -0.91
SSM4P40318 HIS1YER055C 894 nt9.38□□□□□ -0.91
SSM4P40318 RRP9YPR137W 1722 nt9.38□□□□□ -0.91
SSM4P40318 PTC4YBR125C 1182 nt9.37□□□□□ -0.91
SSM4P40318 YMR279CYMR279C 1623 nt9.37□□□□□ -0.91
SSM4P40318 EFM1YHL039W 1758 nt9.37□□□□□ -0.91
SSM4P40318 YMR295CYMR295C 594 nt9.36□□□□□ -0.91
SSM4P40318 TOS6YNL300W 309 nt9.36□□□□□ -0.91
SSM4P40318 ARE2YNR019W 1929 nt9.36□□□□□ -0.91
SSM4P40318 SRF1YDL133W 1314 nt9.36□□□□□ -0.91
SSM4P40318 COX10YPL172C 1389 nt9.36□□□□□ -0.91
SSM4P40318 YLL066CYLL066C 3618 nt9.35□□□□□ -0.91
SSM4P40318 MSP1YGR028W 1089 nt9.35□□□□□ -0.91
SSM4P40318 TDH2YJR009C 999 nt9.35□□□□□ -0.91
SSM4P40318 SRL2YLR082C 1179 nt9.35□□□□□ -0.91
SSM4P40318 RFC4YOL094C 972 nt9.35□□□□□ -0.91
SSM4P40318 CTF19YPL018W 1110 nt9.35□□□□□ -0.91
SSM4P40318 YPL257WYPL257W 582 nt9.35□□□□□ -0.91
SSM4P40318 YHL018WYHL018W 363 nt9.34□□□□□ -0.91
SSM4P40318 YMR122CYMR122C 375 nt9.34□□□□□ -0.91
SSM4P40318 YNL120CYNL120C 486 nt9.34□□□□□ -0.91
SSM4P40318 RPL5YPL131W 894 nt9.34□□□□□ -0.91
SSM4P40318 YPR196WYPR196W 1413 nt9.34□□□□□ -0.91
SSM4P40318 SEC23YPR181C 2307 nt9.34□□□□□ -0.91
SSM4P40318 SDH4YDR178W 546 nt9.33□□□□□ -0.92
SSM4P40318 COX16YJL003W 357 nt9.33□□□□□ -0.92
SSM4P40318 ATO2YNR002C 849 nt9.33□□□□□ -0.92
SSM4P40318 UIP5YKR044W 1332 nt9.33□□□□□ -0.92
SSM4P40318 ZWF1YNL241C 1518 nt9.33□□□□□ -0.92
SSM4P40318 FAL1YDR021W 1200 nt9.32□□□□□ -0.92
SSM4P40318 YJR107WYJR107W 987 nt9.32□□□□□ -0.92
SSM4P40318 FSF1YOR271C 984 nt9.32□□□□□ -0.92
SSM4P40318 YPL250W-AYPL250W-A 288 nt9.32□□□□□ -0.92
SSM4P40318 KIN1YDR122W 3195 nt9.32□□□□□ -0.92
SSM4P40318 PPH22YDL188C 1134 nt9.31□□□□□ -0.92
SSM4P40318 YPT1YFL038C 621 nt9.31□□□□□ -0.92
SSM4P40318 MSY1YPL097W 1479 nt9.31□□□□□ -0.92
SSM4P40318 LYS1YIR034C 1122 nt9.31□□□□□ -0.92
SSM4P40318 OPI11YPR044C 354 nt9.31□□□□□ -0.92
SSM4P40318 YDR415CYDR415C 1125 nt9.3□□□□□ -0.92
SSM4P40318 FBA1YKL060C 1080 nt9.3□□□□□ -0.92
SSM4P40318 GLC8YMR311C 690 nt9.3□□□□□ -0.92
SSM4P40318 ADH5YBR145W 1056 nt9.3□□□□□ -0.92
SSM4P40318 Q0010Q0010 387 nt9.3□□□□□ -0.92
SSM4P40318 MAS1YLR163C 1389 nt9.29□□□□□ -0.92
SSM4P40318 VPS24YKL041W 675 nt9.29□□□□□ -0.92
SSM4P40318 GTO3YMR251W 1101 nt9.29□□□□□ -0.92
SSM4P40318 YLR312CYLR312C 1197 nt9.28□□□□□ -0.92
SSM4P40318 AVO2YMR068W 1281 nt9.28□□□□□ -0.92
SSM4P40318 TFG2YGR005C 1203 nt9.27□□□□□ -0.93
SSM4P40318 YGR068W-AYGR068W-A 96 nt9.27□□□□□ -0.93
SSM4P40318 MIA40YKL195W 1212 nt9.27□□□□□ -0.93
SSM4P40318 KSH1YNL024C-A 219 nt9.27□□□□□ -0.93
SSM4P40318 SQT1YIR012W 1296 nt9.26□□□□□ -0.93
SSM4P40318 GCN3YKR026C 918 nt9.26□□□□□ -0.93
SSM4P40318 PRY3YJL078C 2646 nt9.25□□□□□ -0.93
SSM4P40318 GGC1YDL198C 903 nt9.25□□□□□ -0.93
SSM4P40318 FYV1YDR024W 486 nt9.25□□□□□ -0.93
SSM4P40318 MDE1YJR024C 735 nt9.25□□□□□ -0.93
SSM4P40318 PSR2YLR019W 1194 nt9.24□□□□□ -0.93
SSM4P40318 RNH201YNL072W 924 nt9.24□□□□□ -0.93
SSM4P40318 PPS1YBR276C 2424 nt9.22□□□□□ -0.93
SSM4P40318 HRQ1YDR291W 3234 nt9.22□□□□□ -0.93
SSM4P40318 DSF1YEL070W 1509 nt9.21□□□□□ -0.93
SSM4P40318 YNR073CYNR073C 1509 nt9.21□□□□□ -0.93
SSM4P40318 RUF23RUF23 254 nt9.21□□□□□ -0.94
SSM4P40318 AMD2YDR242W 1650 nt9.21□□□□□ -0.94
SSM4P40318 PPT1YGR123C 1542 nt9.2□□□□□ -0.94
SSM4P40318 YDR387CYDR387C 1668 nt9.2□□□□□ -0.94
SSM4P40318 HVG1YER039C 750 nt9.2□□□□□ -0.94
SSM4P40318 LDB16YCL005W 771 nt9.2□□□□□ -0.94
SSM4P40318 YJR154WYJR154W 1041 nt9.19□□□□□ -0.94
SSM4P40318 YLR173WYLR173W 1827 nt9.18□□□□□ -0.94
SSM4P40318 RVB2YPL235W 1416 nt9.18□□□□□ -0.94
SSM4P40318 THI2YBR240C 1353 nt9.17□□□□□ -0.94
SSM4P40318 UTR2YEL040W 1404 nt9.16□□□□□ -0.94
SSM4P40318 PRE3YJL001W 648 nt9.16□□□□□ -0.94
SSM4P40318 FPR3YML074C 1236 nt9.16□□□□□ -0.94
SSM4P40318 RQC1YDR333C 2172 nt9.16□□□□□ -0.94
SSM4P40318 ECM27YJR106W 2178 nt9.16□□□□□ -0.94
SSM4P40318 OPI8YKR035C 642 nt9.15□□□□□ -0.94
Retrieved 100 of 7,029 protein–RNA pairs in 7.8 ms