Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 HIS1YER055C 894 nt8.31□□□□□ -1.08
RTR1P40084 RFC4YOL094C 972 nt8.31□□□□□ -1.08
RTR1P40084 CCT8YJL008C 1707 nt8.31□□□□□ -1.08
RTR1P40084 GNP1YDR508C 1992 nt8.3□□□□□ -1.08
RTR1P40084 PPH22YDL188C 1134 nt8.3□□□□□ -1.08
RTR1P40084 GAL83YER027C 1254 nt8.3□□□□□ -1.08
RTR1P40084 YBR027CYBR027C 333 nt8.3□□□□□ -1.08
RTR1P40084 YPL136WYPL136W 369 nt8.3□□□□□ -1.08
RTR1P40084 PEX31YGR004W 1389 nt8.3□□□□□ -1.08
RTR1P40084 SEC23YPR181C 2307 nt8.3□□□□□ -1.08
RTR1P40084 SRF1YDL133W 1314 nt8.29□□□□□ -1.08
RTR1P40084 YDR187CYDR187C 519 nt8.29□□□□□ -1.08
RTR1P40084 VMA3YEL027W 483 nt8.29□□□□□ -1.08
RTR1P40084 COX16YJL003W 357 nt8.29□□□□□ -1.08
RTR1P40084 YJR146WYJR146W 354 nt8.29□□□□□ -1.08
RTR1P40084 CTF19YPL018W 1110 nt8.29□□□□□ -1.08
RTR1P40084 EFM1YHL039W 1758 nt8.29□□□□□ -1.08
RTR1P40084 HEM2YGL040C 1029 nt8.28□□□□□ -1.08
RTR1P40084 YGR068W-AYGR068W-A 96 nt8.28□□□□□ -1.08
RTR1P40084 OSW2YLR054C 2175 nt8.28□□□□□ -1.08
RTR1P40084 EDE1YBL047C 4146 nt8.27□□□□□ -1.08
RTR1P40084 KIN1YDR122W 3195 nt8.27□□□□□ -1.09
RTR1P40084 GGC1YDL198C 903 nt8.27□□□□□ -1.09
RTR1P40084 MIA40YKL195W 1212 nt8.27□□□□□ -1.09
RTR1P40084 DRE2YKR071C 1047 nt8.27□□□□□ -1.09
RTR1P40084 CDC1YDR182W 1476 nt8.26□□□□□ -1.09
RTR1P40084 FAL1YDR021W 1200 nt8.26□□□□□ -1.09
RTR1P40084 CUP2YGL166W 678 nt8.26□□□□□ -1.09
RTR1P40084 GCN3YKR026C 918 nt8.26□□□□□ -1.09
RTR1P40084 YLR184WYLR184W 348 nt8.26□□□□□ -1.09
RTR1P40084 TOS6YNL300W 309 nt8.26□□□□□ -1.09
RTR1P40084 ATO2YNR002C 849 nt8.26□□□□□ -1.09
RTR1P40084 YPL257WYPL257W 582 nt8.26□□□□□ -1.09
RTR1P40084 RPL5YPL131W 894 nt8.25□□□□□ -1.09
RTR1P40084 YPL250W-AYPL250W-A 288 nt8.25□□□□□ -1.09
RTR1P40084 TAE1YBR261C 699 nt8.25□□□□□ -1.09
RTR1P40084 DYS1YHR068W 1164 nt8.24□□□□□ -1.09
RTR1P40084 OGG1YML060W 1131 nt8.24□□□□□ -1.09
RTR1P40084 MSO1YNR049C 633 nt8.24□□□□□ -1.09
RTR1P40084 OPI11YPR044C 354 nt8.24□□□□□ -1.09
RTR1P40084 HEM1YDR232W 1647 nt8.24□□□□□ -1.09
RTR1P40084 UIP5YKR044W 1332 nt8.24□□□□□ -1.09
RTR1P40084 YDR415CYDR415C 1125 nt8.23□□□□□ -1.09
RTR1P40084 LYS1YIR034C 1122 nt8.23□□□□□ -1.09
RTR1P40084 ARE2YNR019W 1929 nt8.23□□□□□ -1.09
RTR1P40084 YPT1YFL038C 621 nt8.22□□□□□ -1.09
RTR1P40084 KSH1YNL024C-A 219 nt8.22□□□□□ -1.09
RTR1P40084 YNL120CYNL120C 486 nt8.22□□□□□ -1.09
RTR1P40084 SGF29YCL010C 780 nt8.22□□□□□ -1.09
RTR1P40084 YLL066CYLL066C 3618 nt8.21□□□□□ -1.09
RTR1P40084 FRA1YLL029W 2250 nt8.21□□□□□ -1.1
RTR1P40084 YJR107WYJR107W 987 nt8.21□□□□□ -1.1
RTR1P40084 SRL2YLR082C 1179 nt8.21□□□□□ -1.1
RTR1P40084 YGR054WYGR054W 1929 nt8.21□□□□□ -1.1
RTR1P40084 ZWF1YNL241C 1518 nt8.2□□□□□ -1.1
RTR1P40084 YMR122CYMR122C 375 nt8.2□□□□□ -1.1
RTR1P40084 RUF23RUF23 254 nt8.2□□□□□ -1.1
RTR1P40084 PTC3YBL056W 1407 nt8.2□□□□□ -1.1
RTR1P40084 TFG2YGR005C 1203 nt8.19□□□□□ -1.1
RTR1P40084 FRT1YOR324C 1809 nt8.19□□□□□ -1.1
RTR1P40084 MPC2YHR162W 390 nt8.18□□□□□ -1.1
RTR1P40084 TDH2YJR009C 999 nt8.18□□□□□ -1.1
RTR1P40084 IMD1YAR073W 1212 nt8.18□□□□□ -1.1
RTR1P40084 PTC4YBR125C 1182 nt8.18□□□□□ -1.1
RTR1P40084 YMR279CYMR279C 1623 nt8.18□□□□□ -1.1
RTR1P40084 RRP9YPR137W 1722 nt8.17□□□□□ -1.1
RTR1P40084 PPS1YBR276C 2424 nt8.17□□□□□ -1.1
RTR1P40084 YEL075W-AYEL075W-A 612 nt8.17□□□□□ -1.1
RTR1P40084 MDE1YJR024C 735 nt8.17□□□□□ -1.1
RTR1P40084 FBA1YKL060C 1080 nt8.17□□□□□ -1.1
RTR1P40084 YLR463CYLR463C 552 nt8.17□□□□□ -1.1
RTR1P40084 ADH5YBR145W 1056 nt8.17□□□□□ -1.1
RTR1P40084 MSY1YPL097W 1479 nt8.17□□□□□ -1.1
RTR1P40084 MSP1YGR028W 1089 nt8.16□□□□□ -1.1
RTR1P40084 YKR032WYKR032W 315 nt8.16□□□□□ -1.1
RTR1P40084 GTO3YMR251W 1101 nt8.16□□□□□ -1.1
RTR1P40084 YML018CYML018C 1182 nt8.15□□□□□ -1.1
RTR1P40084 SQT1YIR012W 1296 nt8.14□□□□□ -1.11
RTR1P40084 LDB16YCL005W 771 nt8.14□□□□□ -1.11
RTR1P40084 THI2YBR240C 1353 nt8.13□□□□□ -1.11
RTR1P40084 OPI8YKR035C 642 nt8.13□□□□□ -1.11
RTR1P40084 ECM27YJR106W 2178 nt8.12□□□□□ -1.11
RTR1P40084 YLR173WYLR173W 1827 nt8.12□□□□□ -1.11
RTR1P40084 YDR306CYDR306C 1437 nt8.12□□□□□ -1.11
RTR1P40084 YPR196WYPR196W 1413 nt8.12□□□□□ -1.11
RTR1P40084 YDL085C-AYDL085C-A 207 nt8.11□□□□□ -1.11
RTR1P40084 ECM31YBR176W 939 nt8.11□□□□□ -1.11
RTR1P40084 CTF3YLR381W 2202 nt8.1□□□□□ -1.11
RTR1P40084 RQC1YDR333C 2172 nt8.1□□□□□ -1.11
RTR1P40084 FYV1YDR024W 486 nt8.1□□□□□ -1.11
RTR1P40084 CCC2YDR270W 3015 nt8.1□□□□□ -1.11
RTR1P40084 ALR1YOL130W 2580 nt8.1□□□□□ -1.11
RTR1P40084 PMT3YOR321W 2262 nt8.09□□□□□ -1.11
RTR1P40084 YLR312CYLR312C 1197 nt8.09□□□□□ -1.11
RTR1P40084 YMR295CYMR295C 594 nt8.09□□□□□ -1.11
RTR1P40084 GLC8YMR311C 690 nt8.09□□□□□ -1.11
RTR1P40084 SDH4YDR178W 546 nt8.08□□□□□ -1.12
RTR1P40084 VPS24YKL041W 675 nt8.08□□□□□ -1.12
RTR1P40084 MEH1YKR007W 555 nt8.08□□□□□ -1.12
RTR1P40084 FPR3YML074C 1236 nt8.08□□□□□ -1.12
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms