Protein–RNA interactions for Protein: P32842

VMA11, V-type proton ATPase subunit c', yeast

Predictions only

Length 164 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA11	P32842	TSR2	YLR435W	618 nt		5.46	□□□□□ -1.54
VMA11	P32842	SEC62	YPL094C	825 nt		5.46	□□□□□ -1.54
VMA11	P32842	OSW2	YLR054C	2175 nt		5.46	□□□□□ -1.54
VMA11	P32842	TFG2	YGR005C	1203 nt		5.45	□□□□□ -1.54
VMA11	P32842	NAS6	YGR232W	687 nt		5.45	□□□□□ -1.54
VMA11	P32842	RPL31B	YLR406C	342 nt		5.45	□□□□□ -1.54
VMA11	P32842	MIX17	YMR002W	471 nt		5.45	□□□□□ -1.54
VMA11	P32842	IRC5	YFR038W	2562 nt		5.45	□□□□□ -1.54
VMA11	P32842	CDC1	YDR182W	1476 nt		5.45	□□□□□ -1.54
VMA11	P32842	SEC23	YPR181C	2307 nt		5.45	□□□□□ -1.54
VMA11	P32842	KIN1	YDR122W	3195 nt		5.45	□□□□□ -1.54
VMA11	P32842	TDP1	YBR223C	1635 nt		5.45	□□□□□ -1.54
VMA11	P32842	FRE5	YOR384W	2085 nt		5.44	□□□□□ -1.54
VMA11	P32842	YEL075W-A	YEL075W-A	612 nt		5.44	□□□□□ -1.54
VMA11	P32842	GPA1	YHR005C	1419 nt		5.44	□□□□□ -1.54
VMA11	P32842	MHT1	YLL062C	975 nt		5.44	□□□□□ -1.54
VMA11	P32842	YLR463C	YLR463C	552 nt		5.44	□□□□□ -1.54
VMA11	P32842	CUE4	YML101C	354 nt		5.44	□□□□□ -1.54
VMA11	P32842	FPR2	YDR519W	408 nt		5.43	□□□□□ -1.54
VMA11	P32842	YMR122C	YMR122C	375 nt		5.43	□□□□□ -1.54
VMA11	P32842	TMA46	YOR091W	1038 nt		5.43	□□□□□ -1.54
VMA11	P32842	RRP9	YPR137W	1722 nt		5.43	□□□□□ -1.54
VMA11	P32842	YBR284W	YBR284W	2394 nt		5.42	□□□□□ -1.54
VMA11	P32842	HED1	YDR014W-A	489 nt		5.42	□□□□□ -1.54
VMA11	P32842	YDR187C	YDR187C	519 nt		5.42	□□□□□ -1.54
VMA11	P32842	LOT6	YLR011W	576 nt		5.42	□□□□□ -1.54
VMA11	P32842	YBR027C	YBR027C	333 nt		5.42	□□□□□ -1.54
VMA11	P32842	YDR387C	YDR387C	1668 nt		5.42	□□□□□ -1.54
VMA11	P32842	DOT1	YDR440W	1749 nt		5.42	□□□□□ -1.54
VMA11	P32842	YMR034C	YMR034C	1305 nt		5.42	□□□□□ -1.54
VMA11	P32842	ENB1	YOL158C	1821 nt		5.41	□□□□□ -1.54
VMA11	P32842	YKR045C	YKR045C	552 nt		5.41	□□□□□ -1.54
VMA11	P32842	AVO2	YMR068W	1281 nt		5.41	□□□□□ -1.54
VMA11	P32842	YNL092W	YNL092W	1203 nt		5.41	□□□□□ -1.54
VMA11	P32842	MRPL23	YOR150W	492 nt		5.41	□□□□□ -1.54
VMA11	P32842	SMK1	YPR054W	1167 nt		5.41	□□□□□ -1.54
VMA11	P32842	EFM1	YHL039W	1758 nt		5.41	□□□□□ -1.54
VMA11	P32842	RGT2	YDL138W	2292 nt		5.41	□□□□□ -1.54
VMA11	P32842	CUP2	YGL166W	678 nt		5.4	□□□□□ -1.54
VMA11	P32842	TDH2	YJR009C	999 nt		5.4	□□□□□ -1.54
VMA11	P32842	YML018C	YML018C	1182 nt		5.4	□□□□□ -1.54
VMA11	P32842	TAE1	YBR261C	699 nt		5.4	□□□□□ -1.54
VMA11	P32842	SLX5	YDL013W	1860 nt		5.4	□□□□□ -1.55
VMA11	P32842	GPD2	YOL059W	1323 nt		5.4	□□□□□ -1.55
VMA11	P32842	UBP13	YBL067C	2244 nt		5.4	□□□□□ -1.55
VMA11	P32842	AIM3	YBR108W	2844 nt		5.4	□□□□□ -1.55
VMA11	P32842	PAC10	YGR078C	600 nt		5.39	□□□□□ -1.55
VMA11	P32842	YRB2	YIL063C	984 nt		5.39	□□□□□ -1.55
VMA11	P32842	QRI5	YLR204W	336 nt		5.39	□□□□□ -1.55
VMA11	P32842	YHK8	YHR048W	1545 nt		5.38	□□□□□ -1.55
VMA11	P32842	TRS31	YDR472W	852 nt		5.38	□□□□□ -1.55
VMA11	P32842	HHY1	YEL059W	309 nt		5.38	□□□□□ -1.55
VMA11	P32842	CBR1	YIL043C	855 nt		5.38	□□□□□ -1.55
VMA11	P32842	DPH5	YLR172C	903 nt		5.38	□□□□□ -1.55
VMA11	P32842	CYC8	YBR112C	2901 nt		5.37	□□□□□ -1.55
VMA11	P32842	URH1	YDR400W	1023 nt		5.37	□□□□□ -1.55
VMA11	P32842	VMA3	YEL027W	483 nt		5.37	□□□□□ -1.55
VMA11	P32842	YSC83	YHR017W	1158 nt		5.37	□□□□□ -1.55
VMA11	P32842	YHR213W-B	YHR213W-B	300 nt		5.37	□□□□□ -1.55
VMA11	P32842	YAR064W	YAR064W	300 nt		5.37	□□□□□ -1.55
VMA11	P32842	UIP5	YKR044W	1332 nt		5.37	□□□□□ -1.55
VMA11	P32842	POP1	YNL221C	2628 nt		5.37	□□□□□ -1.55
VMA11	P32842	GLN3	YER040W	2193 nt		5.36	□□□□□ -1.55
VMA11	P32842	YCR041W	YCR041W	333 nt		5.36	□□□□□ -1.55
VMA11	P32842	MSP1	YGR028W	1089 nt		5.36	□□□□□ -1.55
VMA11	P32842	YNL200C	YNL200C	741 nt		5.36	□□□□□ -1.55
VMA11	P32842	FSF1	YOR271C	984 nt		5.36	□□□□□ -1.55
VMA11	P32842	COQ1	YBR003W	1422 nt		5.36	□□□□□ -1.55
VMA11	P32842	HAL5	YJL165C	2568 nt		5.35	□□□□□ -1.55
VMA11	P32842	YHR020W	YHR020W	2067 nt		5.35	□□□□□ -1.55
VMA11	P32842	NMT1	YLR195C	1368 nt		5.35	□□□□□ -1.55
VMA11	P32842	TUF1	YOR187W	1314 nt		5.35	□□□□□ -1.55
VMA11	P32842	YDL177C	YDL177C	513 nt		5.35	□□□□□ -1.55
VMA11	P32842	RNH201	YNL072W	924 nt		5.35	□□□□□ -1.55
VMA11	P32842	NUP84	YDL116W	2181 nt		5.35	□□□□□ -1.55
VMA11	P32842	ZWF1	YNL241C	1518 nt		5.34	□□□□□ -1.55
VMA11	P32842	HXK2	YGL253W	1461 nt		5.34	□□□□□ -1.55
VMA11	P32842	COX10	YPL172C	1389 nt		5.34	□□□□□ -1.55
VMA11	P32842	YGR127W	YGR127W	939 nt		5.34	□□□□□ -1.55
VMA11	P32842	SCS7	YMR272C	1155 nt		5.34	□□□□□ -1.55
VMA11	P32842	MET8	YBR213W	825 nt		5.34	□□□□□ -1.55
VMA11	P32842	CCT8	YJL008C	1707 nt		5.34	□□□□□ -1.56
VMA11	P32842	PPM2	YOL141W	2088 nt		5.33	□□□□□ -1.56
VMA11	P32842	YLR112W	YLR112W	420 nt		5.33	□□□□□ -1.56
VMA11	P32842	YMR295C	YMR295C	594 nt		5.33	□□□□□ -1.56
VMA11	P32842	CTF19	YPL018W	1110 nt		5.33	□□□□□ -1.56
VMA11	P32842	AVT4	YNL101W	2142 nt		5.33	□□□□□ -1.56
VMA11	P32842	PAC2	YER007W	1557 nt		5.33	□□□□□ -1.56
VMA11	P32842	GYP8	YFL027C	1494 nt		5.32	□□□□□ -1.56
VMA11	P32842	CEM1	YER061C	1329 nt		5.32	□□□□□ -1.56
VMA11	P32842	AMN1	YBR158W	1650 nt		5.32	□□□□□ -1.56
VMA11	P32842	MRPL10	YNL284C	969 nt		5.32	□□□□□ -1.56
VMA11	P32842	SNT309	YPR101W	528 nt		5.32	□□□□□ -1.56
VMA11	P32842	SGF29	YCL010C	780 nt		5.32	□□□□□ -1.56
VMA11	P32842	YIL055C	YIL055C	1884 nt		5.32	□□□□□ -1.56
VMA11	P32842	CEF1	YMR213W	1773 nt		5.32	□□□□□ -1.56
VMA11	P32842	YKR023W	YKR023W	1593 nt		5.31	□□□□□ -1.56
VMA11	P32842	PPH22	YDL188C	1134 nt		5.31	□□□□□ -1.56
VMA11	P32842	SNF4	YGL115W	969 nt		5.31	□□□□□ -1.56
VMA11	P32842	MPC2	YHR162W	390 nt		5.31	□□□□□ -1.56

Retrieved 100 of 7,029 protein–RNA pairs in 17.4 ms