Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
COL11A2P13942 AP002414.2-202ENST00000590929 1450 ntBASIC30.8■■■□□ 2.52
COL11A2P13942 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
COL11A2P13942 AL356441.2-201ENST00000443009 864 ntBASIC30.8■■■□□ 2.52
COL11A2P13942 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
COL11A2P13942 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC30.79■■■□□ 2.52
COL11A2P13942 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
COL11A2P13942 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
COL11A2P13942 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC30.78■■■□□ 2.52
COL11A2P13942 ABCB10P3-201ENST00000561950 2166 ntBASIC30.78■■■□□ 2.52
COL11A2P13942 AL031848.2-201ENST00000607670 837 ntBASIC30.78■■■□□ 2.52
COL11A2P13942 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
COL11A2P13942 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
COL11A2P13942 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
COL11A2P13942 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
COL11A2P13942 AL359504.2-201ENST00000605506 1601 ntBASIC30.78■■■□□ 2.52
COL11A2P13942 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC30.78■■■□□ 2.52
COL11A2P13942 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
COL11A2P13942 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC30.76■■■□□ 2.52
COL11A2P13942 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
COL11A2P13942 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC30.76■■■□□ 2.51
COL11A2P13942 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
COL11A2P13942 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
COL11A2P13942 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC30.75■■■□□ 2.51
COL11A2P13942 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
COL11A2P13942 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
COL11A2P13942 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
COL11A2P13942 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC30.72■■■□□ 2.51
COL11A2P13942 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC30.72■■■□□ 2.51
COL11A2P13942 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.71■■■□□ 2.51
COL11A2P13942 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
COL11A2P13942 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
COL11A2P13942 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC30.7■■■□□ 2.51
COL11A2P13942 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC30.7■■■□□ 2.51
COL11A2P13942 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
COL11A2P13942 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
COL11A2P13942 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC30.69■■■□□ 2.5
COL11A2P13942 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
COL11A2P13942 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
COL11A2P13942 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.68■■■□□ 2.5
COL11A2P13942 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
COL11A2P13942 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
COL11A2P13942 AC018755.3-202ENST00000596210 929 ntBASIC30.68■■■□□ 2.5
COL11A2P13942 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
COL11A2P13942 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
COL11A2P13942 MTX2-204ENST00000443241 799 ntTSL 3 BASIC30.67■■■□□ 2.5
COL11A2P13942 RNF146-205ENST00000477776 762 ntTSL 3 BASIC30.67■■■□□ 2.5
COL11A2P13942 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC30.67■■■□□ 2.5
COL11A2P13942 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
COL11A2P13942 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
COL11A2P13942 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
COL11A2P13942 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
COL11A2P13942 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
COL11A2P13942 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC30.66■■■□□ 2.5
COL11A2P13942 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
COL11A2P13942 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
COL11A2P13942 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
COL11A2P13942 AL139393.2-201ENST00000608721 2025 ntBASIC30.65■■■□□ 2.5
COL11A2P13942 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.65■■■□□ 2.5
COL11A2P13942 LSM7-203ENST00000585409 512 ntTSL 2 BASIC30.64■■■□□ 2.5
COL11A2P13942 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC30.64■■■□□ 2.5
COL11A2P13942 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
COL11A2P13942 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
COL11A2P13942 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
COL11A2P13942 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC30.63■■■□□ 2.49
COL11A2P13942 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
COL11A2P13942 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.62■■■□□ 2.49
COL11A2P13942 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC30.62■■■□□ 2.49
COL11A2P13942 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
COL11A2P13942 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
COL11A2P13942 TK2-216ENST00000564917 1156 ntTSL 3 BASIC30.61■■■□□ 2.49
COL11A2P13942 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
COL11A2P13942 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC30.6■■■□□ 2.49
COL11A2P13942 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
COL11A2P13942 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC30.6■■■□□ 2.49
COL11A2P13942 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.6■■■□□ 2.49
COL11A2P13942 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
COL11A2P13942 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
COL11A2P13942 WHAMMP3-201ENST00000611636 1609 ntBASIC30.59■■■□□ 2.49
COL11A2P13942 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
COL11A2P13942 CREM-229ENST00000474362 1030 ntTSL 2 BASIC30.59■■■□□ 2.49
COL11A2P13942 GRAMD4P7-201ENST00000578182 1232 ntBASIC30.59■■■□□ 2.49
COL11A2P13942 AC019171.1-201ENST00000601251 1056 ntBASIC30.59■■■□□ 2.49
COL11A2P13942 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
COL11A2P13942 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
COL11A2P13942 Z92544.1-202ENST00000571933 1220 ntBASIC30.58■■■□□ 2.49
COL11A2P13942 AC087393.1-201ENST00000582896 145 ntBASIC30.58■■■□□ 2.49
COL11A2P13942 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
COL11A2P13942 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
COL11A2P13942 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
COL11A2P13942 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC30.57■■■□□ 2.48
COL11A2P13942 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.57■■■□□ 2.48
COL11A2P13942 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC30.56■■■□□ 2.48
COL11A2P13942 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
COL11A2P13942 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
COL11A2P13942 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
COL11A2P13942 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC30.56■■■□□ 2.48
COL11A2P13942 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
COL11A2P13942 AC239859.2-201ENST00000444165 318 ntBASIC30.55■■■□□ 2.48
COL11A2P13942 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms