Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MRPL3P09001 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MRPL3P09001 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MRPL3P09001 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MRPL3P09001 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MRPL3P09001 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MRPL3P09001 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.87■■□□□ 1.09
MRPL3P09001 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MRPL3P09001 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
MRPL3P09001 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
MRPL3P09001 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.87■■□□□ 1.09
MRPL3P09001 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
MRPL3P09001 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
MRPL3P09001 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
MRPL3P09001 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MRPL3P09001 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.86■■□□□ 1.09
MRPL3P09001 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MRPL3P09001 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
MRPL3P09001 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.85■■□□□ 1.09
MRPL3P09001 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
MRPL3P09001 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MRPL3P09001 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
MRPL3P09001 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MRPL3P09001 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
MRPL3P09001 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MRPL3P09001 DUX4L29-201ENST00000425409 679 ntBASIC21.84■■□□□ 1.09
MRPL3P09001 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.84■■□□□ 1.09
MRPL3P09001 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.84■■□□□ 1.09
MRPL3P09001 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MRPL3P09001 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MRPL3P09001 ERN1-208ENST00000606895 2068 ntBASIC21.84■■□□□ 1.09
MRPL3P09001 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.83■■□□□ 1.09
MRPL3P09001 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
MRPL3P09001 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.83■■□□□ 1.09
MRPL3P09001 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
MRPL3P09001 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
MRPL3P09001 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
MRPL3P09001 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MRPL3P09001 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
MRPL3P09001 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.82■■□□□ 1.08
MRPL3P09001 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MRPL3P09001 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MRPL3P09001 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MRPL3P09001 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
MRPL3P09001 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MRPL3P09001 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
MRPL3P09001 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.81■■□□□ 1.08
MRPL3P09001 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MRPL3P09001 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.8■■□□□ 1.08
MRPL3P09001 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.8■■□□□ 1.08
MRPL3P09001 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
MRPL3P09001 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MRPL3P09001 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MRPL3P09001 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
MRPL3P09001 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MRPL3P09001 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MRPL3P09001 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MRPL3P09001 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MRPL3P09001 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MRPL3P09001 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MRPL3P09001 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.78■■□□□ 1.08
MRPL3P09001 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MRPL3P09001 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MRPL3P09001 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MRPL3P09001 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.77■■□□□ 1.08
MRPL3P09001 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
MRPL3P09001 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.77■■□□□ 1.08
MRPL3P09001 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
MRPL3P09001 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
MRPL3P09001 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
MRPL3P09001 AC010501.1-201ENST00000606270 1962 ntBASIC21.76■■□□□ 1.07
MRPL3P09001 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.76■■□□□ 1.07
MRPL3P09001 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MRPL3P09001 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
MRPL3P09001 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MRPL3P09001 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.75■■□□□ 1.07
MRPL3P09001 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MRPL3P09001 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.75■■□□□ 1.07
MRPL3P09001 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MRPL3P09001 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.75■■□□□ 1.07
MRPL3P09001 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
MRPL3P09001 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MRPL3P09001 AC093323.1-202ENST00000635031 2045 ntBASIC21.75■■□□□ 1.07
MRPL3P09001 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.74■■□□□ 1.07
MRPL3P09001 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MRPL3P09001 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.74■■□□□ 1.07
MRPL3P09001 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MRPL3P09001 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
MRPL3P09001 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MRPL3P09001 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MRPL3P09001 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
MRPL3P09001 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MRPL3P09001 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MRPL3P09001 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.72■■□□□ 1.07
MRPL3P09001 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.72■■□□□ 1.07
MRPL3P09001 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
MRPL3P09001 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MRPL3P09001 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
MRPL3P09001 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MRPL3P09001 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms