Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
IFNA1P01562 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
IFNA1P01562 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IFNA1P01562 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IFNA1P01562 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IFNA1P01562 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IFNA1P01562 PKD1P6-201ENST00000343738 4769 ntBASIC19.34■□□□□ 0.69
IFNA1P01562 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IFNA1P01562 AP004609.3-201ENST00000610705 1884 ntBASIC19.34■□□□□ 0.69
IFNA1P01562 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
IFNA1P01562 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
IFNA1P01562 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.33■□□□□ 0.68
IFNA1P01562 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
IFNA1P01562 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.32■□□□□ 0.68
IFNA1P01562 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IFNA1P01562 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFNA1P01562 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFNA1P01562 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFNA1P01562 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IFNA1P01562 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
IFNA1P01562 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.32■□□□□ 0.68
IFNA1P01562 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFNA1P01562 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
IFNA1P01562 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IFNA1P01562 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IFNA1P01562 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFNA1P01562 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IFNA1P01562 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.31■□□□□ 0.68
IFNA1P01562 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFNA1P01562 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFNA1P01562 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
IFNA1P01562 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
IFNA1P01562 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IFNA1P01562 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFNA1P01562 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFNA1P01562 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.3■□□□□ 0.68
IFNA1P01562 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFNA1P01562 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFNA1P01562 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
IFNA1P01562 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFNA1P01562 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.29■□□□□ 0.68
IFNA1P01562 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IFNA1P01562 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
IFNA1P01562 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFNA1P01562 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IFNA1P01562 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.28■□□□□ 0.68
IFNA1P01562 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.28■□□□□ 0.68
IFNA1P01562 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.27■□□□□ 0.68
IFNA1P01562 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.27■□□□□ 0.68
IFNA1P01562 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IFNA1P01562 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
IFNA1P01562 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
IFNA1P01562 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
IFNA1P01562 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
IFNA1P01562 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
IFNA1P01562 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IFNA1P01562 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
IFNA1P01562 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.26■□□□□ 0.67
IFNA1P01562 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.26■□□□□ 0.67
IFNA1P01562 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
IFNA1P01562 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
IFNA1P01562 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFNA1P01562 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFNA1P01562 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
IFNA1P01562 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFNA1P01562 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFNA1P01562 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.25■□□□□ 0.67
IFNA1P01562 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFNA1P01562 AC133561.1-201ENST00000568600 2415 ntBASIC19.25■□□□□ 0.67
IFNA1P01562 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFNA1P01562 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IFNA1P01562 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFNA1P01562 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFNA1P01562 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFNA1P01562 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFNA1P01562 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFNA1P01562 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
IFNA1P01562 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
IFNA1P01562 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.24■□□□□ 0.67
IFNA1P01562 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.24■□□□□ 0.67
IFNA1P01562 ZNRF2P1-201ENST00000441407 443 ntBASIC19.24■□□□□ 0.67
IFNA1P01562 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFNA1P01562 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFNA1P01562 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IFNA1P01562 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
IFNA1P01562 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IFNA1P01562 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IFNA1P01562 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IFNA1P01562 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.23■□□□□ 0.67
IFNA1P01562 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IFNA1P01562 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IFNA1P01562 AL139125.2-201ENST00000623134 1869 ntBASIC19.23■□□□□ 0.67
IFNA1P01562 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
IFNA1P01562 AL133380.1-201ENST00000506013 324 ntBASIC19.23■□□□□ 0.67
IFNA1P01562 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.22■□□□□ 0.67
IFNA1P01562 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.22■□□□□ 0.67
IFNA1P01562 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IFNA1P01562 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.22■□□□□ 0.67
IFNA1P01562 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IFNA1P01562 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms