Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHKB-CPT1BH3BT56 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHKB-CPT1BH3BT56 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHKB-CPT1BH3BT56 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHKB-CPT1BH3BT56 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHKB-CPT1BH3BT56 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHKB-CPT1BH3BT56 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHKB-CPT1BH3BT56 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHKB-CPT1BH3BT56 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CHKB-CPT1BH3BT56 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHKB-CPT1BH3BT56 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHKB-CPT1BH3BT56 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHKB-CPT1BH3BT56 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHKB-CPT1BH3BT56 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHKB-CPT1BH3BT56 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CHKB-CPT1BH3BT56 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHKB-CPT1BH3BT56 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHKB-CPT1BH3BT56 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHKB-CPT1BH3BT56 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CHKB-CPT1BH3BT56 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHKB-CPT1BH3BT56 CLDN5-201ENST00000403084 2357 ntBASIC13.87□□□□□ -0.19
CHKB-CPT1BH3BT56 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHKB-CPT1BH3BT56 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHKB-CPT1BH3BT56 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC13.87□□□□□ -0.19
CHKB-CPT1BH3BT56 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC13.86□□□□□ -0.19
CHKB-CPT1BH3BT56 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHKB-CPT1BH3BT56 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHKB-CPT1BH3BT56 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHKB-CPT1BH3BT56 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHKB-CPT1BH3BT56 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC13.86□□□□□ -0.19
CHKB-CPT1BH3BT56 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHKB-CPT1BH3BT56 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHKB-CPT1BH3BT56 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHKB-CPT1BH3BT56 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHKB-CPT1BH3BT56 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHKB-CPT1BH3BT56 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHKB-CPT1BH3BT56 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
CHKB-CPT1BH3BT56 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHKB-CPT1BH3BT56 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC13.85□□□□□ -0.19
CHKB-CPT1BH3BT56 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC13.85□□□□□ -0.19
CHKB-CPT1BH3BT56 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CHKB-CPT1BH3BT56 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHKB-CPT1BH3BT56 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHKB-CPT1BH3BT56 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC13.84□□□□□ -0.19
CHKB-CPT1BH3BT56 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHKB-CPT1BH3BT56 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC13.84□□□□□ -0.19
CHKB-CPT1BH3BT56 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHKB-CPT1BH3BT56 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHKB-CPT1BH3BT56 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHKB-CPT1BH3BT56 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHKB-CPT1BH3BT56 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHKB-CPT1BH3BT56 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHKB-CPT1BH3BT56 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC13.84□□□□□ -0.19
CHKB-CPT1BH3BT56 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CHKB-CPT1BH3BT56 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHKB-CPT1BH3BT56 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CHKB-CPT1BH3BT56 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
CHKB-CPT1BH3BT56 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CHKB-CPT1BH3BT56 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CHKB-CPT1BH3BT56 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHKB-CPT1BH3BT56 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHKB-CPT1BH3BT56 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHKB-CPT1BH3BT56 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHKB-CPT1BH3BT56 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHKB-CPT1BH3BT56 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHKB-CPT1BH3BT56 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHKB-CPT1BH3BT56 AC133561.1-201ENST00000568600 2415 ntBASIC13.83□□□□□ -0.2
CHKB-CPT1BH3BT56 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHKB-CPT1BH3BT56 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHKB-CPT1BH3BT56 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC13.82□□□□□ -0.2
CHKB-CPT1BH3BT56 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHKB-CPT1BH3BT56 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHKB-CPT1BH3BT56 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC13.82□□□□□ -0.2
CHKB-CPT1BH3BT56 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHKB-CPT1BH3BT56 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHKB-CPT1BH3BT56 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CHKB-CPT1BH3BT56 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CHKB-CPT1BH3BT56 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC13.82□□□□□ -0.2
CHKB-CPT1BH3BT56 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHKB-CPT1BH3BT56 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHKB-CPT1BH3BT56 ST7-AS1-201ENST00000456775 1889 ntBASIC13.81□□□□□ -0.2
CHKB-CPT1BH3BT56 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC13.81□□□□□ -0.2
CHKB-CPT1BH3BT56 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHKB-CPT1BH3BT56 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHKB-CPT1BH3BT56 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHKB-CPT1BH3BT56 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHKB-CPT1BH3BT56 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CHKB-CPT1BH3BT56 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHKB-CPT1BH3BT56 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CHKB-CPT1BH3BT56 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC13.8□□□□□ -0.2
CHKB-CPT1BH3BT56 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
CHKB-CPT1BH3BT56 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC13.8□□□□□ -0.2
CHKB-CPT1BH3BT56 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC13.8□□□□□ -0.2
CHKB-CPT1BH3BT56 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHKB-CPT1BH3BT56 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHKB-CPT1BH3BT56 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CHKB-CPT1BH3BT56 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC13.8□□□□□ -0.2
CHKB-CPT1BH3BT56 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHKB-CPT1BH3BT56 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
CHKB-CPT1BH3BT56 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms